RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 COL15A1P39059 1388 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 COL4A5P29400 1685 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 CDH23Q9H251 3354 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FASNP49327 2511 aaKnown RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 TRANK1O15050 2925 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ASGR2P07307 311 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FPR2P25090 351 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 HOXC9P31274 260 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC16A1P53985 500 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 HERVK_113P62684 666 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 MRPS9P82933 396 aaKnown RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SP3Q02447 781 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC14A2Q15849 920 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 STEAP3Q658P3 488 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLCO6A1Q86UG4 719 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM43AQ8N2R8 423 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 TMEM52Q8NDY8 209 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SHKBP1Q8TBC3 707 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PLEKHO2Q8TD55 490 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SEC14L1Q92503 715 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 CDCA5Q96FF9 252 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 TEKT5Q96M29 485 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM193BQ96PV7 902 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ASB2Q96Q27 587 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 EPHX3Q9H6B9 360 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZMAT4Q9H898 229 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ATP13A1Q9HD20 1204 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PDLIM7Q9NR12 457 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 SAP30BPQ9UHR5 308 aaKnown RBP5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 MSRAQ9UJ68 235 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 NUDT5Q9UKK9 219 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZBTB21Q9ULJ3 1066 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PLAGL2Q9UPG8 496 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 GPR45Q9Y5Y3 372 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 NPC1L1Q9UHC9 1359 aa5.78□□□□□ -1.48
HMGB1P23-201ENST00000518743 PTPRZ1P23471 2315 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MYO9BQ13459 2157 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 ST20-MTHFSA0A0A6YYL1 179 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 UBE2Q2LH0YL09 131 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 NKRFO15226 690 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 PPIP5K2O43314 1243 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 CTNND1O60716 968 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 COL6A2P12110 1019 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 FOSL1P15407 271 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 NPR1P16066 1061 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 HTR3AP46098 478 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 RTP1P59025 263 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MRPS5P82675 430 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 TMEM132BQ14DG7 1078 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 UGT8Q16880 541 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 TBC1D10BQ4KMP7 808 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 C4orf46Q504U0 113 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MOB2Q70IA6 237 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 OXR1Q8N573 874 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 ATXN2LQ8WWM7 1075 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 LINC01599Q8WXQ3 324 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 RUNDC1Q96C34 613 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC39A13Q96H72 371 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 C16orf92Q96LL3 132 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 MTA3Q9BTC8 594 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 THEGQ9P2T0 379 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 CNOT7Q9UIV1 285 aaKnown RBP5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 ALPK3Q96L96 1907 aa5.77□□□□□ -1.49
HMGB1P23-201ENST00000518743 CDHR2Q9BYE9 1310 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 KDM3BQ7LBC6 1761 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 TCRBV5S4A2TA0A5A2 114 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 DVL2O14641 736 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FOXP2O15409 715 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA12O60330 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 BUB1BO60566 1050 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FURINP09958 794 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 H2AFB1P0C5Y9 115 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 AGXTP21549 392 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 GJA9P57773 515 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FKBP1BP68106 108 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 ANO4Q32M45 955 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 COBLL1Q53SF7 1204 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 GJC2Q5T442 439 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 BTBD8Q5XKL5 378 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 TBC1D9BQ66K14 1250 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 INTS5Q6P9B9 1019 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 CHST15Q7LFX5 561 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PLD6Q8N2A8 252 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 FERMT2Q96AC1 680 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 IL17RAQ96F46 866 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 TNIP3Q96KP6 325 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 LRGUKQ96M69 825 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 MAP3K14Q99558 947 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 ELAC2Q9BQ52 826 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 UBA5Q9GZZ9 404 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 SEMA6BQ9H3T3 888 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms