RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 MTMR9Q96QG7 549 aa20.11■□□□□ 0.81
TFF3-204ENST00000518498 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
TFF3-204ENST00000518498 SMOC2Q9H3U7 446 aa20.11■□□□□ 0.81
TFF3-204ENST00000518498 FBXO2Q9UK22 296 aaPredicted RBP20.11■□□□□ 0.81
TFF3-204ENST00000518498 FAN1Q9Y2M0 1017 aa20.11■□□□□ 0.81
TFF3-204ENST00000518498 DDHD2O94830 711 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 MBD3O95983 291 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 P4HBP07237 508 aaKnown RBP20.1■□□□□ 0.81
TFF3-204ENST00000518498 LONP1P36776 959 aaKnown RBP20.1■□□□□ 0.81
TFF3-204ENST00000518498 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 GPR149Q86SP6 731 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 TMEM105Q8N8V8 129 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 TMEM175Q9BSA9 504 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 VN1R3Q9BXE9 311 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 SFXN1Q9H9B4 322 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 RSAD1Q9HA92 442 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 KCNMB3Q9NPA1 279 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 PPME1Q9Y570 386 aa20.1■□□□□ 0.81
TFF3-204ENST00000518498 SSBP05455 408 aaKnown RBP eCLIP20.09■□□□□ 0.81
TFF3-204ENST00000518498 RFC5P40937 340 aa20.09■□□□□ 0.81
TFF3-204ENST00000518498 SKOR2Q2VWA4 1001 aaPredicted RBP20.09■□□□□ 0.81
TFF3-204ENST00000518498 ASTLQ6HA08 431 aaPredicted RBP20.09■□□□□ 0.81
TFF3-204ENST00000518498 PSPC1Q8WXF1 523 aaKnown RBP20.09■□□□□ 0.81
TFF3-204ENST00000518498 TMEM143Q96AN5 459 aa20.09■□□□□ 0.81
TFF3-204ENST00000518498 AK8Q96MA6 479 aa20.09■□□□□ 0.81
TFF3-204ENST00000518498 MFSD1Q9H3U5 465 aa20.09■□□□□ 0.81
TFF3-204ENST00000518498 DHX33Q9H6R0 707 aaKnown RBP20.09■□□□□ 0.81
TFF3-204ENST00000518498 MRPL17Q9NRX2 175 aaKnown RBP20.09■□□□□ 0.81
TFF3-204ENST00000518498 VAV3Q9UKW4 847 aa20.09■□□□□ 0.81
TFF3-204ENST00000518498 STK24Q9Y6E0 443 aa20.09■□□□□ 0.81
TFF3-204ENST00000518498 CNTNAP2Q9UHC6 1331 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 VWA3AA6NCI4 1184 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 NRP1O14786 923 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 ASAP2O43150 1006 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 B4GALT3O60512 393 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 CNPP09543 421 aaKnown RBP20.08■□□□□ 0.81
TFF3-204ENST00000518498 CMA1P23946 247 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 HOXA11P31270 313 aaPredicted RBP20.08■□□□□ 0.81
TFF3-204ENST00000518498 FXR2P51116 673 aaKnown RBP eCLIP20.08■□□□□ 0.81
TFF3-204ENST00000518498 CLCN4P51793 760 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 CLCN5P51795 746 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 AFF1P51825 1210 aaKnown RBP20.08■□□□□ 0.81
TFF3-204ENST00000518498 LAMTOR4Q0VGL1 99 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 PDIA5Q14554 519 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 AXDND1Q5T1B0 1012 aaPredicted RBP20.08■□□□□ 0.81
TFF3-204ENST00000518498 OTUD6AQ7L8S5 288 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 OTOP3Q7RTS5 596 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 CNNM3Q8NE01 707 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 TCP11Q8WWU5 503 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 MINDY3Q9H8M7 445 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 UBN1Q9NPG3 1134 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 PCDHA12Q9UN75 941 aa20.08■□□□□ 0.81
TFF3-204ENST00000518498 PROB1E7EW31 1015 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 LILRB3O75022 631 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 POMCP01189 267 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 TXLNAP40222 546 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 TXKP42681 527 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 EPHA7Q15375 998 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 UBXN11Q5T124 520 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 CCDC149Q6ZUS6 474 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 C4orf19Q8IY42 314 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 HAS1Q92839 578 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 TTC12Q9H892 705 aaPredicted RBP20.07■□□□□ 0.8
TFF3-204ENST00000518498 WRAP73Q9P2S5 460 aaPredicted RBP20.07■□□□□ 0.8
TFF3-204ENST00000518498 SSX2IPQ9Y2D8 614 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 MYO10Q9HD67 2058 aa20.07■□□□□ 0.8
TFF3-204ENST00000518498 GAS2O43903 313 aaKnown RBP20.06■□□□□ 0.8
TFF3-204ENST00000518498 ITGA4P13612 1032 aa20.06■□□□□ 0.8
TFF3-204ENST00000518498 YWHABP31946 246 aaKnown RBP20.06■□□□□ 0.8
TFF3-204ENST00000518498 TDGQ13569 410 aa20.06■□□□□ 0.8
TFF3-204ENST00000518498 CCDC73Q6ZRK6 1079 aa20.06■□□□□ 0.8
TFF3-204ENST00000518498 RNF149Q8NC42 400 aa20.06■□□□□ 0.8
TFF3-204ENST00000518498 FEZF2Q8TBJ5 459 aa20.06■□□□□ 0.8
TFF3-204ENST00000518498 PYM1Q9BRP8 204 aaKnown RBP20.06■□□□□ 0.8
TFF3-204ENST00000518498 CSRNP2Q9H175 543 aa20.06■□□□□ 0.8
TFF3-204ENST00000518498 SLC26A4O43511 780 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 GADD45BO75293 160 aaPredicted RBP20.05■□□□□ 0.8
TFF3-204ENST00000518498 NCBP1Q09161 790 aaKnown RBP20.05■□□□□ 0.8
TFF3-204ENST00000518498 XKR9Q5GH70 373 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 RESP18Q5W5W9 173 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 C15orf39Q6ZRI6 1047 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 FLCNQ8NFG4 579 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 CLIC6Q96NY7 704 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 BMP2KQ9NSY1 1161 aaPredicted RBP20.05■□□□□ 0.8
TFF3-204ENST00000518498 RGL1Q9NZL6 768 aa20.05■□□□□ 0.8
TFF3-204ENST00000518498 C2CD2LO14523 706 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 ERLIN2O94905 339 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 SOD2P04179 222 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 URODP06132 367 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 AXLP30530 894 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 EMC2Q15006 297 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 PCBP1Q15365 356 aaKnown RBP eCLIP20.04■□□□□ 0.8
TFF3-204ENST00000518498 IGSF22Q8N9C0 903 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 FSIP1Q8NA03 581 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 SMG8Q8ND04 991 aaKnown RBP20.04■□□□□ 0.8
TFF3-204ENST00000518498 DYDC2Q96IM9 177 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 RPS6KC1Q96S38 1066 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 LXNQ9BS40 222 aa20.04■□□□□ 0.8
TFF3-204ENST00000518498 ZSWIM4Q9H7M6 989 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms