RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 IPO4Q8TEX9 1081 aaKnown RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 PGM2Q96G03 612 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 FOXO6A8MYZ6 492 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 MUTP22033 750 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 FKBP1AP62942 108 aaKnown RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 RASA3Q14644 834 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 SIX1Q15475 284 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 NBPF9Q3BBW0 867 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 PHLDB2Q86SQ0 1253 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 SLC13A5Q86YT5 568 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 FMNL3Q8IVF7 1028 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 FAM71AQ8IYT1 594 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 C3orf20Q8ND61 904 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 CHURC1Q8WUH1 139 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 ACCSQ96QU6 501 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 PRMT1Q99873 361 aaKnown RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
PTPN7-217ENST00000495688 CNOT10Q9H9A5 744 aaKnown RBP13.99□□□□□ -0.17
PTPN7-217ENST00000495688 CCDC169A6NNP5 214 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 CLDN3O15551 220 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 RIPK2O43353 540 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 P4HBP07237 508 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 DLATP10515 647 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 PLS3P13797 630 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 ADSSP30520 456 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 SCTRP47872 440 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 C1orf54Q8WWF1 131 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 CCT6BQ92526 530 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 ZNF653Q96CK0 615 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 RIT2Q99578 217 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 DDX23Q9BUQ8 820 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 TRIM7Q9C029 511 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 HOMER2Q9NSB8 354 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 HERC5Q9UII4 1024 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 PFASO15067 1338 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 ZNFX1Q9P2E3 1918 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 DGKZQ13574 1117 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 SNX1Q13596 522 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 C2CD6Q53TS8 623 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 PLA2G4FQ68DD2 849 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 OTUD6AQ7L8S5 288 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 LRRC34Q8IZ02 419 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 RPS6KC1Q96S38 1066 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 DNAJC17Q9NVM6 304 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 PODXLO00592 558 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 TP73O15350 636 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 SOX10P56693 466 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 MYBPC2Q14324 1141 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 DAB2IPQ5VWQ8 1189 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 LLGL2Q6P1M3 1020 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 FUKQ8N0W3 1084 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 TMEM39BQ9GZU3 492 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 EHMT1Q9H9B1 1298 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 INTS9Q9NV88 658 aaKnown RBP13.98□□□□□ -0.17
PTPN7-217ENST00000495688 CCPG1Q9ULG6 757 aa13.98□□□□□ -0.17
PTPN7-217ENST00000495688 ALAS1P13196 640 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 CYP11B1P15538 503 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 CREB1P16220 341 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 IBSPP21815 317 aaPredicted RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 YWHABP31946 246 aaKnown RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 DRP2Q13474 957 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 SNRNP35Q16560 246 aaKnown RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 TAS1R2Q8TE23 839 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 WNT8AQ9H1J5 351 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 VEZTQ9HBM0 779 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 MTRF1LQ9UGC7 380 aaKnown RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 TRPC5Q9UL62 973 aaPredicted RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 ZNF536O15090 1300 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 ACSL3O95573 720 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 QARSP47897 775 aaKnown RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 GTF2BQ00403 316 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 TRAF1Q13077 416 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 AUHQ13825 339 aaKnown RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 LRRC14Q15048 493 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 TRIP13Q15645 432 aaPredicted RBP13.97□□□□□ -0.17
PTPN7-217ENST00000495688 SHC3Q92529 594 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 CENPTQ96BT3 561 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 HERPUD2Q9BSE4 406 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
PTPN7-217ENST00000495688 ASTN2O75129 1339 aaPredicted RBP13.96□□□□□ -0.17
PTPN7-217ENST00000495688 H0YIN7 160 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 RASGRF2O14827 1237 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 P4HA2O15460 535 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 ATP9AO75110 1047 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 GZMAP12544 262 aa13.96□□□□□ -0.17
PTPN7-217ENST00000495688 HSPA6P17066 643 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms