RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-210	ENST00000485247	MAPK1	P28482	360 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	ADD2	P35612	726 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	MRPL12	P52815	198 aa	Known RBP	6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	RPS6	P62753	249 aa	Known RBP	6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	PAN2	Q504Q3	1202 aa	Known RBP	6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	NAALADL2	Q58DX5	795 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	ANKRD54	Q6NXT1	300 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	LLGL2	Q6P1M3	1020 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	ZC3H14	Q6PJT7	736 aa	Known RBP	6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	RASGRP2	Q7LDG7	609 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	SSH3	Q8TE77	659 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	FBLIM1	Q8WUP2	373 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	ZNF689	Q96CS4	500 aa	Predicted RBP	6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	RTP3	Q9BQQ7	232 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	KRTAP4-8	Q9BYQ9	185 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	BCL11A	Q9H165	835 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	POMK	Q9H5K3	350 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	PCMTD2	Q9NV79	361 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	ACTL7B	Q9Y614	415 aa		6.26	□□□□□ -1.41
PTPN4-210	ENST00000485247	C17orf102	A2RUQ5	167 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	ENPP3	O14638	875 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	PLA2G6	O60733	806 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	SLC16A2	P36021	539 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	ATP8B2	P98198	1209 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	DMWD	Q09019	674 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	SBK1	Q52WX2	424 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	RCSD1	Q6JBY9	416 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	TMEM184A	Q6ZMB5	413 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	DNER	Q8NFT8	737 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	CLEC4D	Q8WXI8	215 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	CDCA3	Q99618	268 aa	Predicted RBP	6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	CORO1B	Q9BR76	489 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	PUS7L	Q9H0K6	701 aa	Known RBP	6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	RANBP17	Q9H2T7	1088 aa	Known RBP	6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	ERVK-5	Q9HDB9	667 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	NCDN	Q9UBB6	729 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	DDX41	Q9UJV9	622 aa	Known RBP	6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	FBXL21	Q9UKT6	434 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	NOP58	Q9Y2X3	529 aa	Known RBP	6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	OTOGL	Q3ZCN5	2332 aa		6.25	□□□□□ -1.41
PTPN4-210	ENST00000485247	PNMA6F	A0A0J9YX94	578 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	FSD2	A1L4K1	749 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	EIF4EBP3	O60516	100 aa	Predicted RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	F13B	P05160	661 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	WEE2	P0C1S8	567 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SP9	P0CG40	484 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	TSPY3	P0CV98	308 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	TSPY8	P0CW00	308 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SMIM10L2A	P0DMW4	78 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SMIM10L2B	P0DMW5	78 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	GHR	P10912	638 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	HOXB8	P17481	243 aa	Predicted RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SPINK2	P20155	84 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	ERVFC1	P60507	584 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	TFAP4	Q01664	338 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SLFN5	Q08AF3	891 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	KCNC3	Q14003	757 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	ENOX2	Q16206	610 aa	Known RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	CCDC96	Q2M329	555 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SPECC1	Q5M775	1068 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	TTBK2	Q6IQ55	1244 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	CES5A	Q6NT32	575 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	CMTR2	Q8IYT2	770 aa	Known RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	FAM9B	Q8IZU0	186 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	TDRD5	Q8NAT2	981 aa	Known RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	SUMF1	Q8NBK3	374 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	PPTC7	Q8NI37	304 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	EZH1	Q92800	747 aa	Predicted RBP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	NECTIN4	Q96NY8	510 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	RTKN	Q9BST9	563 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	BCO2	Q9BYV7	579 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	RNPEP	Q9H4A4	650 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	IL1RAPL2	Q9NP60	686 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	STX8	Q9UNK0	236 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	TNN	Q9UQP3	1299 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	MRVI1	Q9Y6F6	885 aa		6.24	□□□□□ -1.41
PTPN4-210	ENST00000485247	FASN	P49327	2511 aa	Known RBP	6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	FAM95C	A0A1B0GW59	222 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	GSG1L2	A8MUP6	293 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	PRR5-ARHGAP8	B1AHC4	643 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	WDR64	B1ANS9	1081 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	CAND2	O75155	1236 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	PPFIA4	O75335	1185 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	CHRNA1	P02708	482 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	IBSP	P21815	317 aa	Predicted RBP	6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	ADM	P35318	185 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	USP11	P51784	963 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	RARS	P54136	660 aa	Known RBP	6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	ARHGAP8	P85298	464 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	LMNB2	Q03252	620 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	APOBR	Q0VD83	1088 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	UBE3C	Q15386	1083 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	STXBP2	Q15833	593 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	HSDL1	Q3SXM5	330 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	PPM1J	Q5JR12	505 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	SPOUT1	Q5T280	376 aa	Known RBP	6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	PLPP4	Q5VZY2	271 aa		6.23	□□□□□ -1.41
PTPN4-210	ENST00000485247	ZDHHC14	Q8IZN3	488 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms