RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RASIP1Q5U651 963 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 NUGGCQ68CJ6 796 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 RHOT2Q8IXI1 618 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 HAS1Q92839 578 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 MRPL47Q9HD33 250 aaKnown RBP12.08□□□□□ -0.48
SMPD4-218ENST00000482171 NGRNQ9NPE2 291 aaKnown RBP12.08□□□□□ -0.48
SMPD4-218ENST00000482171 EHD2Q9NZN4 543 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 APEX2Q9UBZ4 518 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 YDJCA8MPS7 323 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 ADM5C9JUS6 153 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 SGK1O00141 431 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 TXNDC9O14530 226 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 MEIS2O14770 477 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 CIITAP33076 1130 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 CCDC62Q6P9F0 684 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 DUSP9Q99956 384 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 MRPL4Q9BYD3 311 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 ZWILCHQ9H900 591 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 LUC7L3O95232 432 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 PHKA2P46019 1235 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 RFX6Q8HWS3 928 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 EXOC8Q8IYI6 725 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 NUP85Q9BW27 656 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 EDEM3Q9BZQ6 932 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 NACA2Q9H009 215 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 EPN3Q9H201 632 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 NOP53Q9NZM5 478 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 SUCLA2Q9P2R7 463 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 COL14A1Q05707 1796 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 A0A087X0T9 212 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 CIB2O75838 187 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 CSPG5O95196 566 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 FAM228BP0C875 321 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 MDH1P40925 334 aaKnown RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 KCNA1Q09470 495 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 CBWD2Q8IUF1 395 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 GDAP1Q8TB36 358 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-218ENST00000482171 ZIM3Q96PE6 472 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 KIAA1586Q9HCI6 787 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 MLXIPLQ9NP71 852 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 SEPT10Q9P0V9 454 aa12.07□□□□□ -0.48
SMPD4-218ENST00000482171 ATMINO43313 823 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PRKCBP05771 671 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 GNA15P30679 374 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 SLC20A2Q08357 652 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 TBX2Q13207 712 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 MOXD1Q6UVY6 613 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 OR2W6PQ8NHA6 318 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 ZNF564Q8TBZ8 553 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 SNX25Q9H3E2 840 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PLAGL2Q9UPG8 496 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 CCL15-CCL14A0A0B4J2E2 113 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 POC1B-GALNT4F8VUJ3 575 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 ARL1P40616 181 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 CARSP49589 748 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 RWDD2BP57060 319 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PPP2R2AP63151 447 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 DR1Q01658 176 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 GABPAQ06546 454 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 CCL15Q16663 113 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 SPOUT1Q5T280 376 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 NME8Q8N427 588 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 KCNV2Q8TDN2 545 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 TRIM11Q96F44 468 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 GEMIN8Q9NWZ8 242 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 GGT7Q9UJ14 662 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 H0Y3Z8 333 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PPP1R11O60927 126 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 POLE2P56282 527 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 WDR72Q3MJ13 1102 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 KLHDC7AQ5VTJ3 777 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 ARL8AQ96BM9 186 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 AGPAT1Q99943 283 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PIK3R2O00459 728 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 RASGRF2O14827 1237 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 KIF1CO43896 1103 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 SLITRK3O94933 977 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 ECEL1O95672 775 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 CYP2B6P20813 491 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 GPC3P51654 580 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 CUL1Q13616 776 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PALM2Q8IXS6 379 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 POP1Q99575 1024 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 KIAA1683Q9H0B3 1180 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 PCSK1NQ9UHG2 260 aa12.06□□□□□ -0.48
SMPD4-218ENST00000482171 DMGDHQ9UI17 866 aaKnown RBP12.06□□□□□ -0.48
SMPD4-218ENST00000482171 SSU72P8A0A1W2PR75 194 aa12.05□□□□□ -0.48
SMPD4-218ENST00000482171 SLC16A3O15427 465 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms