RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 NOGQ13253 232 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 PPP4R3AQ6IN85 833 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 CCDC149Q6ZUS6 474 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 CARFQ8N187 725 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 KLHL36Q8N4N3 616 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 TP53I13Q8NBR0 393 aaPredicted RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 IFI44Q8TCB0 444 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 STRBPQ96SI9 672 aaKnown RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 TMEM168Q9H0V1 697 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 C14orf93Q9H972 538 aaKnown RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 KMT5AQ9NQR1 393 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 GPRC5DQ9NZD1 345 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 SMG5Q9UPR3 1016 aaKnown RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 A0A088AWK7 358 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 MTSS1O43312 755 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 TOX4O94842 621 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 ZNF280AP59817 542 aaPredicted RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 FAM193AP78312 1265 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 NKX6-1P78426 367 aaPredicted RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 HGFACQ04756 655 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 PICALMQ13492 652 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 USP10Q14694 798 aaKnown RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 ACAP1Q15027 740 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 CNN3Q15417 329 aaKnown RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 TRMT2AQ8IZ69 625 aaKnown RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 PQLC1Q8N2U9 271 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 ADAMTS17Q8TE56 1095 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 SLC7A6OSQ96CW6 309 aaPredicted RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 CLPTM1LQ96KA5 538 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 NT5C1BQ96P26 610 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 PTPN18Q99952 460 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 OR10A2Q9H208 303 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 ATP6V0A4Q9HBG4 840 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 TDP1Q9NUW8 608 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 CNOT6Q9ULM6 557 aaKnown RBP7.54□□□□□ -1.2
VPS50-212ENST00000476413 PCDHGB6Q9Y5F9 930 aa7.54□□□□□ -1.2
VPS50-212ENST00000476413 ITGA10O75578 1167 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 SYN1P17600 705 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 CRHR1P34998 444 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 ADCY7P51828 1080 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 RAB1AP62820 205 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 TLE1Q04724 770 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 KIAA0753Q2KHM9 967 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 FAM26FQ5R3K3 315 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 THEMIS2Q5TEJ8 643 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 MCTP1Q6DN14 999 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 REPS2Q8NFH8 660 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 CCHCR1Q8TD31 782 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 LPPQ93052 612 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 CDK5RAP3Q96JB5 506 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 LDAHQ9H6V9 325 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 MANSC1Q9H8J5 431 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 FAM184BQ9ULE4 1060 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 PHTF1Q9UMS5 762 aa7.53□□□□□ -1.2
VPS50-212ENST00000476413 CAPN8A6NHC0 703 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 C9orf118A6NHY6 69 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 CYP1A1P04798 512 aaPredicted RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 PCSK1P29120 753 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 ATP2C1P98194 919 aaPredicted RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 MTM1Q13496 603 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 KHDC1Q4VXA5 237 aaKnown RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 USP30Q70CQ3 517 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 MAEAQ7L5Y9 396 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 DAAM2Q86T65 1068 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 ZNF761Q86XN6 746 aaPredicted RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 C3orf20Q8ND61 904 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 VRK1Q99986 396 aaPredicted RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 ENKD1Q9H0I2 346 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 BARX1Q9HBU1 254 aaPredicted RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 POLHQ9Y253 713 aa7.52□□□□□ -1.21
VPS50-212ENST00000476413 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.21
VPS50-212ENST00000476413 ATRNL1Q5VV63 1379 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 PLEKHD1A6NEE1 506 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 GASTP01350 101 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 RPLP2P05387 115 aaKnown RBP7.51□□□□□ -1.21
VPS50-212ENST00000476413 IFIT2P09913 472 aaKnown RBP7.51□□□□□ -1.21
VPS50-212ENST00000476413 VSIG10L2P0DP72 767 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 FPR1P21462 350 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 SERPINB3P29508 390 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 HTR3AP46098 478 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 LINC00310P59036 64 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 SNAPC2Q13487 334 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 BRD3Q15059 726 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 PRAMEF14Q5SWL7 426 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 RNF220Q5VTB9 566 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 DARS2Q6PI48 645 aaKnown RBP7.51□□□□□ -1.21
VPS50-212ENST00000476413 APOA5Q6Q788 366 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 HEATR3Q7Z4Q2 680 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 FBXO18Q8NFZ0 1043 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 PARD3BQ8TEW8 1205 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 CFHR4Q92496 578 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 CYFIP2Q96F07 1278 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms