RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 FOXR2Q6PJQ5 311 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 SLC24A5Q71RS6 500 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 EPM2AIP1Q7L775 607 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-205ENST00000473879 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.54□□□□□ -0.08
BRAT1-205ENST00000473879 FIBCD1Q8N539 461 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 FBXO22Q8NEZ5 403 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
BRAT1-205ENST00000473879 KCNN1Q92952 543 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 ZNF668Q96K58 619 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-205ENST00000473879 SCLT1Q96NL6 688 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 NFKBIZQ9BYH8 718 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 INO80BQ9C086 356 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-205ENST00000473879 ST6GALNAC4Q9H4F1 302 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 IFT122Q9HBG6 1241 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 KMT5AQ9NQR1 393 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 MTUS1Q9ULD2 1270 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 ADGRA3Q8IWK6 1321 aa14.54□□□□□ -0.08
BRAT1-205ENST00000473879 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 A0A087WZ62 844 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 CCDC169A6NNP5 214 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 MYBP10242 640 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 ZSCAN20P17040 1043 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 NMT1P30419 496 aaKnown RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 NAMPTP43490 491 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 NPTX2P47972 431 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 STX17P56962 302 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 MXD4Q14582 209 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 EPC2Q52LR7 807 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 CENPPQ6IPU0 288 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 ZNF720Q7Z2F6 126 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 RHPN2Q8IUC4 686 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 TMEM192Q8IY95 271 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 CMTR2Q8IYT2 770 aaKnown RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 ZNF507Q8TCN5 953 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 GDPD5Q8WTR4 605 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 NOC3LQ8WTT2 800 aaKnown RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 SCFD1Q8WVM8 642 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 CLP1Q92989 425 aaKnown RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 FIZ1Q96SL8 496 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 FDXACB1Q9BRP7 624 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 ELAC1Q9H777 363 aaKnown RBP14.53□□□□□ -0.08
BRAT1-205ENST00000473879 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 LRFN2Q9ULH4 789 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 PCDHB7Q9Y5E2 793 aa14.53□□□□□ -0.08
BRAT1-205ENST00000473879 KIAA1671Q9BY89 1806 aa14.52□□□□□ -0.08
BRAT1-205ENST00000473879 C5orf67F2Z3F1 127 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 ASAP2O43150 1006 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 FGFR1OPO95684 399 aaKnown RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 RB1P06400 928 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 LINC00271P0C7V0 271 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 CASP5P51878 434 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 TFDP1Q14186 410 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 BTG3Q14201 252 aaPredicted RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 NCAPHQ15003 741 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 CCDC85BQ15834 202 aaPredicted RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 KNOP1Q1ED39 458 aaKnown RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 CDCA2Q69YH5 1023 aaPredicted RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 TTI2Q6NXR4 508 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 HAUS6Q7Z4H7 955 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 NELFCDQ8IXH7 590 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 GLIS3Q8NEA6 775 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 ASAP3Q8TDY4 903 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 PRPF31Q8WWY3 499 aaKnown RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 PPM1EQ8WY54 764 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 NTPCRQ9BSD7 190 aaKnown RBP14.52□□□□□ -0.09
BRAT1-205ENST00000473879 FGFBP2Q9BYJ0 223 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 TMEM206Q9H813 350 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 CHST12Q9NRB3 414 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 TMEM161AQ9NX61 479 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 EXOC7Q9UPT5 735 aa14.52□□□□□ -0.09
BRAT1-205ENST00000473879 H3BNC9 293 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 SLC16A4O15374 487 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 CALUO43852 315 aaPredicted RBP14.51□□□□□ -0.09
BRAT1-205ENST00000473879 PPP1R37O75864 691 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 PRPF6O94906 941 aaKnown RBP14.51□□□□□ -0.09
BRAT1-205ENST00000473879 SFPQP23246 707 aaKnown RBP eCLIP14.51□□□□□ -0.09
BRAT1-205ENST00000473879 GLRA2P23416 452 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 BMPR1AP36894 532 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 GTF2BQ00403 316 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 LAMTOR4Q0VGL1 99 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 CAPSQ13938 189 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 HS2ST1Q7LGA3 356 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 KSR1Q8IVT5 923 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 DEPTORQ8TB45 409 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 GOLGA5Q8TBA6 731 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 BSNDQ8WZ55 320 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 NLRP4Q96MN2 994 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 TRAIPQ9BWF2 469 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 STRA6Q9BX79 667 aa14.51□□□□□ -0.09
BRAT1-205ENST00000473879 TYW1Q9NV66 732 aaKnown RBP14.51□□□□□ -0.09
BRAT1-205ENST00000473879 REV3LO60673 3130 aa14.5□□□□□ -0.09
BRAT1-205ENST00000473879 TRIM49BA6NDI0 452 aa14.5□□□□□ -0.09
BRAT1-205ENST00000473879 LRRIQ4A6NIV6 560 aa14.5□□□□□ -0.09
BRAT1-205ENST00000473879 PDXKO00764 312 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms