RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ATXN2Q99700 1313 aaKnown RBP7.6□□□□□ -1.19
HDAC3-206ENST00000471968 PLK4O00444 970 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 NRG2O14511 850 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-206ENST00000471968 ZNF263O14978 683 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 XYLBO75191 536 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 AFPP02771 609 aaKnown RBP7.6□□□□□ -1.19
HDAC3-206ENST00000471968 PSMC3P17980 439 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 BCKDHBP21953 392 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 CCND2P30279 289 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 NFKB2Q00653 900 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 CCDC173Q0VFZ6 552 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 MAPK8IP2Q13387 824 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-206ENST00000471968 KIZQ2M2Z5 673 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 GNPTABQ3T906 1256 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 PREPLQ4J6C6 727 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-206ENST00000471968 C2orf27AQ580R0 203 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 PPP4R3BQ5MIZ7 849 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 ARHGAP40Q5TG30 622 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 LIN9Q5TKA1 542 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 LILRA6Q6PI73 481 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 SLC23A3Q6PIS1 610 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 ARMCX6Q7L4S7 300 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 TMC8Q8IU68 726 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 NAXDQ8IW45 347 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 SPRYD3Q8NCJ5 442 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 TTC8Q8TAM2 541 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 CSGALNACT1Q8TDX6 532 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 TTC9Q92623 222 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 MSANTD3Q96H12 275 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 LRRC4CQ9HCJ2 640 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 KIAA1522Q9P206 1035 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-206ENST00000471968 CELSR1Q9NYQ6 3014 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 CACNA1DQ01668 2161 aa7.6□□□□□ -1.19
HDAC3-206ENST00000471968 MTORP42345 2549 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 A0A0U1RQF3 1178 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 SPECC1L-ADORA2AF8WAN1 911 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 C8AP07357 584 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 HNRNPA1P09651 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 CEBPBP17676 345 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 RPL17P18621 184 aaKnown RBP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 TNFRSF8P28908 595 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 MLLT6P55198 1093 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 GFPT1Q06210 699 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 KCNH2Q12809 1159 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 SLC5A9Q2M3M2 681 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 NOMO2Q5JPE7 1267 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 RRP12Q5JTH9 1297 aaKnown RBP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 FAM78AQ5JUQ0 283 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 MTHFD1LQ6UB35 978 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 VITQ6UXI7 678 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 C11orf74Q86VG3 221 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 SYT12Q8IV01 421 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 WDR63Q8IWG1 891 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 SPACA3Q8IXA5 215 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 LPPQ93052 612 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 NXPE2Q96DL1 559 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 B3GALT6Q96L58 329 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 C8orf33Q9H7E9 229 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 CPNE5Q9HCH3 593 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 IL17RBQ9NRM6 502 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 DNMT3BQ9UBC3 853 aaKnown RBP7.59□□□□□ -1.19
HDAC3-206ENST00000471968 FAN1Q9Y2M0 1017 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 CELSR2Q9HCU4 2923 aa7.59□□□□□ -1.19
HDAC3-206ENST00000471968 SPG11Q96JI7 2443 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 TSPY2A6NKD2 308 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 GOLGA8CPA6NN73 597 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 GSG1L2A8MUP6 293 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 SPATA31C2B4DYI2 1134 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 ARNTLO00327 626 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 ZNF862O60290 1169 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 ATG13O75143 517 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 C1RP00736 705 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 ALDH2P05091 517 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 CTHP32929 405 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 DGKEP52429 567 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 CRYBB1P53674 252 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-206ENST00000471968 DSG1Q02413 1049 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 GRM4Q14833 912 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 USP39Q53GS9 565 aaKnown RBP7.58□□□□□ -1.2
HDAC3-206ENST00000471968 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-206ENST00000471968 GLB1LQ6UWU2 654 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 GLRX5Q86SX6 157 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 SSH1Q8WYL5 1049 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 TPSD1Q9BZJ3 242 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 PUS7LQ9H0K6 701 aaKnown RBP7.58□□□□□ -1.2
HDAC3-206ENST00000471968 CPVLQ9H3G5 476 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 SMARCAD1Q9H4L7 1026 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 FBXW11Q9UKB1 542 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 PRG3Q9Y2Y8 225 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-206ENST00000471968 MRPL11Q9Y3B7 192 aaKnown RBP7.58□□□□□ -1.2
HDAC3-206ENST00000471968 AK5Q9Y6K8 562 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 ICE1Q9Y2F5 2266 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 DOCK5Q9H7D0 1870 aa7.58□□□□□ -1.2
HDAC3-206ENST00000471968 GSTTP1A0A1W2PQM5 241 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 MYBPHLA2RUH7 354 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 E9PAM4 449 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 NRP1O14786 923 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 FIBPO43427 364 aa7.57□□□□□ -1.2
HDAC3-206ENST00000471968 SURF6O75683 361 aaKnown RBP7.57□□□□□ -1.2
HDAC3-206ENST00000471968 DDHD2O94830 711 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms