RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CNGA1P29973 690 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 COILP38432 576 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 POLGP54098 1239 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 PDCD2Q16342 344 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 MAPKAPK5Q8IW41 473 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 LRRC37BQ96QE4 947 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 EPAS1Q99814 870 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 NMRK1Q9NWW6 199 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 DNAJC12Q9UKB3 198 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 SSR1P43307 286 aaKnown RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 LBRQ14739 615 aaKnown RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 SEL1L2Q5TEA6 688 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 MTHFD1LQ6UB35 978 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 PRUNE1Q86TP1 453 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 AGGF1Q8N302 714 aaeCLIP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 UBL4BQ8N7F7 174 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 ATMINO43313 823 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 RNF8O76064 485 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 TTLL1O95922 423 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 ACADSP16219 412 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 ATP5DP30049 168 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 HOXA7P31268 230 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 PSMC6P62333 389 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 PABPC4Q13310 644 aaKnown RBP eCLIP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 RCN2Q14257 317 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 ARHGEF18Q6ZSZ5 1173 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 TRMT10CQ7L0Y3 403 aaKnown RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 SLC7A6OSQ96CW6 309 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 ZSWIM1Q9BR11 485 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 METTL5Q9NRN9 209 aaKnown RBP14.73□□□□□ -0.05
NPHP4-207ENST00000470763 TRAF3IP3Q9Y228 551 aa14.73□□□□□ -0.05
NPHP4-207ENST00000470763 RSPH10B2B2RC85 870 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 SMAPO00193 183 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 SPAG7O75391 227 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 MED24O75448 989 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 RSPH10BP0C881 870 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 DLATP10515 647 aaKnown RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 COMTP21964 271 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 VPS41P49754 854 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 CCDC15Q0P6D6 951 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 SGSM1Q2NKQ1 1148 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 TBC1D25Q3MII6 688 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 RBM26Q5T8P6 1007 aaKnown RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 FOXB2Q5VYV0 432 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 B4GALNT2Q8NHY0 566 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 ZNF526Q8TF50 670 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 C1orf54Q8WWF1 131 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 EZH1Q92800 747 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 CELF1Q92879 486 aaKnown RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 EYA3Q99504 573 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 ASIC3Q9UHC3 531 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 ATP8B3O60423 1300 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 SCN7AQ01118 1682 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 E7ENQ6 273 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 T-ENOLP0DO92 83 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 ALAS1P13196 640 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 RBM5P52756 815 aaKnown RBP eCLIP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 RFWD3Q6PCD5 774 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 APBB1IPQ7Z5R6 666 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-207ENST00000470763 SLC20A1Q8WUM9 679 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 KIFAP3Q92845 792 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 BTBD6Q96KE9 485 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 REEP2Q9BRK0 252 aa14.72□□□□□ -0.05
NPHP4-207ENST00000470763 ASTN1O14525 1302 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 KDM3AQ9Y4C1 1321 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 TP73O15350 636 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 NVLO15381 856 aaKnown RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 THAP12O43422 761 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 CHRNB2P17787 502 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 STRN3Q13033 797 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 ACVR2BQ13705 512 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 CCDC6Q16204 474 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 OR52E8Q6IFG1 317 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 FBXO33Q7Z6M2 555 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 DRAXINQ8NBI3 349 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 CEP95Q96GE4 821 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 DHX36Q9H2U1 1008 aaKnown RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 RGL1Q9NZL6 768 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 ESYT2A0FGR8 921 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 ANKRD62A6NC57 917 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 CALUO43852 315 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 ECEL1O95672 775 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 RANBP1P43487 201 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 WDR4P57081 412 aaKnown RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 KRT17Q04695 432 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 KHDC1Q4VXA5 237 aaKnown RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 MIGA2Q7L4E1 593 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 ENDOVQ8N8Q3 282 aaKnown RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-207ENST00000470763 GORASP1Q9BQQ3 440 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 VCXQ9H320 206 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 PCMTD2Q9NV79 361 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 PHTF1Q9UMS5 762 aa14.71□□□□□ -0.05
NPHP4-207ENST00000470763 ABLIM1O14639 778 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 GCNT3O95395 438 aa14.71□□□□□ -0.06
NPHP4-207ENST00000470763 HIBADHP31937 336 aaKnown RBP14.71□□□□□ -0.06
NPHP4-207ENST00000470763 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms