RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 FOSL1P15407 271 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 MARCKSP29966 332 aaPredicted RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 ICAM3P32942 547 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 SYKP43405 635 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 SETQ01105 290 aaPredicted RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 SREBF2Q12772 1141 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 BAATQ14032 418 aaPredicted RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 TAF1CQ15572 869 aaPredicted RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 IL17AQ16552 155 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CALCRLQ16602 461 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 FAM110CQ1W6H9 321 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CEP55Q53EZ4 464 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 HYIQ5T013 277 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CCDC183Q5T5S1 534 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 B3GNT9Q6UX72 402 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CCDC73Q6ZRK6 1079 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CYFIP1Q7L576 1253 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 FAM133AQ8N9E0 248 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 GPRC5AQ8NFJ5 357 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 RIN3Q8TB24 985 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 MORC4Q8TE76 937 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 NSUN6Q8TEA1 469 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 ZNF526Q8TF50 670 aaPredicted RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 GIPC2Q8TF65 315 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 HAS1Q92839 578 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 LENG9Q96B70 501 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CCDC34Q96HJ3 373 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 TAAR1Q96RJ0 339 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 PARK7Q99497 189 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 PTPN18Q99952 460 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 PDCD2LQ9BRP1 358 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 DUSP23Q9BVJ7 150 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 MOV10L1Q9BXT6 1211 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 CSRNP2Q9H175 543 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 CUEDC2Q9H467 287 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 PIDD1Q9HB75 910 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 A1CFQ9NQ94 594 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 PXMP2Q9NR77 195 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 ADD3Q9UEY8 706 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 DDX25Q9UHL0 483 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 PCOLCE2Q9UKZ9 415 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 PCDHA12Q9UN75 941 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 DIS3Q9Y2L1 958 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 OAS3Q9Y6K5 1087 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 GOLGB1Q14789 3259 aaKnown RBP6.16□□□□□ -1.42
VPS41-211ENST00000466017 A0A0G2JMZ2 1700 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 MYH7BA7E2Y1 1941 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 PRAMEF27A3QJZ7 478 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 RASSF10A6NK89 507 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 FAM86B1E9PN63 330 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 CYP26A1O43174 497 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 TLR2O60603 784 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 EIF3JO75822 258 aaKnown RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 TDP2O95551 362 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 MYL1P05976 194 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 FAM86B2P0C5J1 330 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 TGFB3P10600 412 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 ERCC3P19447 782 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 ATP2B1P20020 1258 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 EDNRBP24530 442 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 HOXA13P31271 388 aaPredicted RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 CD96P40200 585 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 NDUFA8P51970 172 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 MRPS9P82933 396 aaKnown RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 PGM5Q15124 567 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 TMEM266Q2M3C6 531 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 DEFB115Q30KQ5 88 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 C17orf99Q6UX52 265 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 BNC2Q6ZN30 1099 aaPredicted RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 OTOP1Q7RTM1 612 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 NLRX1Q86UT6 975 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS41-211ENST00000466017 FAM43AQ8N2R8 423 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 MSL3Q8N5Y2 521 aaKnown RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 TOP6BLQ8N6T0 577 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 FSIP1Q8NA03 581 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 IQUBQ8NA54 791 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 RDM1Q8NG50 284 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 ETNPPLQ8TBG4 499 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 SLC5A5Q92911 643 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 GPRASP2Q96D09 838 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 CDHR1Q96JP9 859 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 CLIC6Q96NY7 704 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 INPP4AQ96PE3 977 aaPredicted RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 RMDN3Q96TC7 470 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 MPHOSPH6Q99547 160 aaKnown RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 RIT2Q99578 217 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 SENP7Q9BQF6 1050 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 YIPF2Q9BWQ6 316 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 CLSTN2Q9H4D0 955 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 TTC12Q9H892 705 aaPredicted RBP6.15□□□□□ -1.42
VPS41-211ENST00000466017 MAGEF1Q9HAY2 307 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 TXNRD2Q9NNW7 524 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 TBC1D22BQ9NU19 505 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 DACT1Q9NYF0 836 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 COL20A1Q9P218 1284 aa6.15□□□□□ -1.42
VPS41-211ENST00000466017 CCDC39Q9UFE4 941 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms