RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 MLF2Q15773 248 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-204ENST00000461098 NTRK3Q16288 839 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 GRASPQ7Z6J2 395 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-204ENST00000461098 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.29
HCFC1-204ENST00000461098 ETNPPLQ8TBG4 499 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 CCDC12Q8WUD4 166 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-204ENST00000461098 PHKBQ93100 1093 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 TMEM143Q96AN5 459 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 CLDN23Q96B33 292 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 BCO2Q9BYV7 579 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
HCFC1-204ENST00000461098 PARD6AQ9NPB6 346 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 CDH7Q9ULB5 785 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 NID2Q14112 1375 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 ASPMQ8IZT6 3477 aa13.27□□□□□ -0.29
HCFC1-204ENST00000461098 EML1O00423 815 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 PSMC5P62195 406 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 LAMTOR4Q0VGL1 99 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 UBXN2BQ14CS0 331 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 POTEHQ6S545 545 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 TSSK4Q6SA08 328 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 TBCKQ8TEA7 893 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 ATRIPQ8WXE1 791 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 FGF13Q92913 245 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 LTB4R2Q9NPC1 389 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
HCFC1-204ENST00000461098 ZSCAN32Q9NX65 697 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 FBXW11Q9UKB1 542 aa13.26□□□□□ -0.29
HCFC1-204ENST00000461098 SMG5Q9UPR3 1016 aaKnown RBP13.26□□□□□ -0.29
HCFC1-204ENST00000461098 PRR5-ARHGAP8B1AHC4 643 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 M0R2N6 131 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 TSPAN1O60635 241 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 ADRB1P08588 477 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 TARSP26639 723 aaKnown RBP13.25□□□□□ -0.29
HCFC1-204ENST00000461098 ARHGAP8P85298 464 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 LMNB2Q03252 620 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 PRSS55Q6UWB4 352 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-204ENST00000461098 RSPO2Q6UXX9 243 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-204ENST00000461098 RABGGTAQ92696 567 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 CLSTN3Q9BQT9 956 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-204ENST00000461098 RTKNQ9BST9 563 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 PRMT8Q9NR22 394 aaPredicted RBP13.25□□□□□ -0.29
HCFC1-204ENST00000461098 ADAM28Q9UKQ2 775 aa13.25□□□□□ -0.29
HCFC1-204ENST00000461098 FRYQ5TBA9 3013 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 TDGF1P13385 188 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 CPA1P15085 419 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 MAGEA9P43362 315 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 AMHR2Q16671 573 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 ZNF687Q8N1G0 1237 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 RNF149Q8NC42 400 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 PSPC1Q8WXF1 523 aaKnown RBP13.24□□□□□ -0.29
HCFC1-204ENST00000461098 SLC7A3Q8WY07 619 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 CPB2Q96IY4 423 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 PAAF1Q9BRP4 392 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 NXF3Q9H4D5 531 aaKnown RBP13.24□□□□□ -0.29
HCFC1-204ENST00000461098 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 VAV3Q9UKW4 847 aa13.24□□□□□ -0.29
HCFC1-204ENST00000461098 CDV3Q9UKY7 258 aaKnown RBP13.24□□□□□ -0.29
HCFC1-204ENST00000461098 ADAM12O43184 909 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
HCFC1-204ENST00000461098 AXLP30530 894 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 RPS9P46781 194 aaKnown RBP13.23□□□□□ -0.29
HCFC1-204ENST00000461098 QARSP47897 775 aaKnown RBP13.23□□□□□ -0.29
HCFC1-204ENST00000461098 NPY5RQ15761 445 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 ZBTB41Q5SVQ8 909 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 MTSS1LQ765P7 747 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 LNX1Q8TBB1 728 aaPredicted RBP13.23□□□□□ -0.29
HCFC1-204ENST00000461098 CEP170P1Q96L14 293 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 PLA2G2FQ9BZM2 168 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
HCFC1-204ENST00000461098 NAP1L2Q9ULW6 460 aaPredicted RBP13.23□□□□□ -0.29
HCFC1-204ENST00000461098 GIT1Q9Y2X7 761 aa13.23□□□□□ -0.29
HCFC1-204ENST00000461098 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 ZBTB39O15060 712 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 CCL16O15467 120 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 SLC37A4O43826 429 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 AKAP5P24588 427 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 HOXA9P31269 272 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 RFC5P40937 340 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 PTENP60484 403 aa13.22□□□□□ -0.29
HCFC1-204ENST00000461098 PFKPQ01813 784 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms