RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CASP10Q92851 521 aa20.87■□□□□ 0.93
COL5A1-203ENST00000460264 PNMA5Q96PV4 448 aa20.87■□□□□ 0.93
COL5A1-203ENST00000460264 S1PR5Q9H228 398 aa20.87■□□□□ 0.93
COL5A1-203ENST00000460264 KLK14Q9P0G3 267 aa20.87■□□□□ 0.93
COL5A1-203ENST00000460264 PARP2Q9UGN5 583 aa20.87■□□□□ 0.93
COL5A1-203ENST00000460264 HIP1RO75146 1068 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 HOXB8P17481 243 aaPredicted RBP20.86■□□□□ 0.93
COL5A1-203ENST00000460264 OR1G1P47890 313 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 GRIK3Q13003 919 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 MAPK7Q13164 816 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 ZRSR1Q15695 479 aaKnown RBP20.86■□□□□ 0.93
COL5A1-203ENST00000460264 EEF1DP3Q658K8 133 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 RINT1Q6NUQ1 792 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 C1orf186Q6ZWK4 172 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 C11orf16Q9NQ32 467 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 TRIP11Q15643 1979 aa20.86■□□□□ 0.93
COL5A1-203ENST00000460264 PHLPP2Q6ZVD8 1323 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 VPS37CA5D8V6 355 aaPredicted RBP20.85■□□□□ 0.93
COL5A1-203ENST00000460264 EFEMP2O95967 443 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 SSBP05455 408 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL5A1-203ENST00000460264 NPTX2P47972 431 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 PEX3P56589 373 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 DMP1Q13316 513 aaPredicted RBP20.85■□□□□ 0.93
COL5A1-203ENST00000460264 NT5DC1Q5TFE4 455 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 RNF168Q8IYW5 571 aaPredicted RBP20.85■□□□□ 0.93
COL5A1-203ENST00000460264 KCTD17Q8N5Z5 321 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 DRC1Q96MC2 740 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 RPS6KC1Q96S38 1066 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 ADPGKQ9BRR6 497 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 APOL5Q9BWW9 433 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 NT5C3AQ9H0P0 336 aa20.85■□□□□ 0.93
COL5A1-203ENST00000460264 PLXNA3P51805 1871 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 CCDC169A6NNP5 214 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 F8W810 466 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 RECQL4O94761 1208 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 SOD2P04179 222 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 ALADP13716 330 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 PDCP20941 246 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 CBX2Q14781 532 aaPredicted RBP20.84■□□□□ 0.93
COL5A1-203ENST00000460264 DCAF4L1Q3SXM0 396 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 TMEM119Q4V9L6 283 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 TMEM87AQ8NBN3 555 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 SLC22A17Q8WUG5 538 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 AK8Q96MA6 479 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 PLIN2Q99541 437 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 HERC2P3Q9BVR0 1158 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 TIPINQ9BVW5 301 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 PHF7Q9BWX1 381 aaPredicted RBP20.84■□□□□ 0.93
COL5A1-203ENST00000460264 ARHGAP28Q9P2N2 729 aa20.84■□□□□ 0.93
COL5A1-203ENST00000460264 LOC730098B7Z3J9 87 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 K7ERI5 159 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 DCXO43602 365 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 LILRB3O75022 631 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 NR1I2O75469 434 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 BMP15O95972 392 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 TPRNQ4KMQ1 711 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 TMEM31Q5JXX7 168 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 ATF7IP2Q5U623 682 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 CABP7Q86V35 215 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 CDK5RAP3Q96JB5 506 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 C17orf75Q9HAS0 396 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 DZANK1Q9NVP4 752 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 SNTG2Q9NY99 539 aa20.83■□□□□ 0.93
COL5A1-203ENST00000460264 TRIOO75962 3097 aa20.83■□□□□ 0.92
COL5A1-203ENST00000460264 DENND4AQ7Z401 1863 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 FAM86C2PA6NEL3 165 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 PTGESO14684 152 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 SLC26A4O43511 780 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 GPR37L1O60883 481 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 URODP06132 367 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 CNPP09543 421 aaKnown RBP20.82■□□□□ 0.92
COL5A1-203ENST00000460264 EPCAMP16422 314 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 COL9A1P20849 921 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 SLC12A3P55017 1021 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 TAS1R3Q7RTX0 852 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 TAS1R1Q7RTX1 841 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 RNF135Q8IUD6 432 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 SYT2Q8N9I0 419 aaPredicted RBP20.82■□□□□ 0.92
COL5A1-203ENST00000460264 LRFN3Q9BTN0 628 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 COLEC11Q9BWP8 271 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 EMILIN2Q9BXX0 1053 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 KMT5AQ9NQR1 393 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 MRPL17Q9NRX2 175 aaKnown RBP20.82■□□□□ 0.92
COL5A1-203ENST00000460264 DAXXQ9UER7 740 aaPredicted RBP20.82■□□□□ 0.92
COL5A1-203ENST00000460264 CDH22Q9UJ99 828 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 TNFSF13BQ9Y275 285 aa20.82■□□□□ 0.92
COL5A1-203ENST00000460264 MYH15Q9Y2K3 1946 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 PLA2G4BP0C869 781 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 GLUD2P49448 558 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 ITIH3Q06033 890 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 RAD51AP2Q09MP3 1159 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 TUSC3Q13454 348 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 SF3A1Q15459 793 aaKnown RBP20.81■□□□□ 0.92
COL5A1-203ENST00000460264 PPFIBP1Q86W92 1011 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 RABGGTAQ92696 567 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 INTS4Q96HW7 963 aaKnown RBP20.81■□□□□ 0.92
COL5A1-203ENST00000460264 KLHL5Q96PQ7 755 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 CXCL16Q9H2A7 254 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 ADAM7Q9H2U9 754 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms