RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 HSPA6P17066 643 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 ECHS1P30084 290 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLC6A9P48067 706 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 DUSP2Q05923 314 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 OS9Q13438 667 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 IL10RAQ13651 578 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 SAFB2Q14151 953 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 HLTFQ14527 1009 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 SURF1Q15526 300 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 LILRA6Q6PI73 481 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 B3GNT9Q6UX72 402 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 CMTM4Q8IZR5 234 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 HPS3Q969F9 1004 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 C12orf65Q9H3J6 166 aaKnown RBP6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 AGO3Q9H9G7 860 aaKnown RBP6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 SEC61A2Q9H9S3 476 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 BCO1Q9HAY6 547 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 GPRC5DQ9NZD1 345 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 SIK3Q9Y2K2 1263 aa6.42□□□□□ -1.38
HMGB1P26-201ENST00000452520 OTOL1A6NHN0 477 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 ITGA10O75578 1167 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 ENDOD1O94919 500 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 GYPEP15421 78 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 CR2P20023 1033 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 CRHR1P34998 444 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 FXR1P51114 621 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 EPHB4P54760 987 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 PER3P56645 1201 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 BRD3Q15059 726 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 GFOD2Q3B7J2 385 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 MIGA2Q7L4E1 593 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 ADGRE4PQ86SQ3 457 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 RHOT1Q8IXI2 618 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 PQLC1Q8N2U9 271 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 SAMD3Q8N6K7 520 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 OR7D4Q8NG98 312 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 ZNF480Q8WV37 535 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 LMF1Q96S06 567 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 PTPN18Q99952 460 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 XYLT2Q9H1B5 865 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 NMRK2Q9NPI5 230 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 NCDNQ9UBB6 729 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 PCDHB1Q9Y5F3 818 aa6.41□□□□□ -1.38
HMGB1P26-201ENST00000452520 LDHAP00338 332 aaKnown RBP6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 SREBF1P36956 1147 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 CASRP41180 1078 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 DSC2Q02487 901 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 C4orf46Q504U0 113 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLFN13Q68D06 897 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 SLC4A10Q6U841 1118 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 KSR2Q6VAB6 950 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 APBB1IPQ7Z5R6 666 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 FRMD5Q7Z6J6 570 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 GRAMD1CQ8IYS0 662 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 GPR135Q8IZ08 494 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 SHCBP1Q8NEM2 672 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 OR5M3Q8NGP4 307 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 KAT5Q92993 513 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 EVI5LQ96CN4 794 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 MVB12AQ96EY5 273 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 CYFIP2Q96F07 1278 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 MAP3K14Q99558 947 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 DPYSL5Q9BPU6 564 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 ENKD1Q9H0I2 346 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 ZCCHC4Q9H5U6 513 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 RCAN3Q9UKA8 241 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 OAZ3Q9UMX2 235 aa6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 CFAP20Q9Y6A4 193 aaKnown RBP6.4□□□□□ -1.38
HMGB1P26-201ENST00000452520 UBE2QL1A1L167 161 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 NRP1O14786 923 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 ADCY6O43306 1168 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 CNR2P34972 360 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 NPEPPSP55786 919 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 RIN1Q13671 783 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 PGS1Q32NB8 556 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 PPP4R3AQ6IN85 833 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 TAX1BP1Q86VP1 789 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 C1GALT1C1Q96EU7 318 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 LRRC37BQ96QE4 947 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 TAAR9Q96RI9 348 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 UHRF1Q96T88 793 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 PDCD2LQ9BRP1 358 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 MANSC1Q9H8J5 431 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 PARD6AQ9NPB6 346 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 IL23AQ9NPF7 189 aa6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 TTBK1Q5TCY1 1321 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P26-201ENST00000452520 VSTM5A8MXK1 200 aa6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 CTNND1O60716 968 aaKnown RBP6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 CDC14BO60729 498 aa6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 DTNBO60941 627 aa6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 RPLP2P05387 115 aaKnown RBP6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 PTPN7P35236 360 aa6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 ARHGAP29Q52LW3 1261 aa6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 TTC7BQ86TV6 843 aa6.38□□□□□ -1.39
HMGB1P26-201ENST00000452520 TRMT2AQ8IZ69 625 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms