RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NRP1O14786 923 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 SLC16A6O15403 523 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 PLIN1O60240 522 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 GYPEP15421 78 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 SLC6A9P48067 706 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 PER3P56645 1201 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 GJA9P57773 515 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 ATP2C1P98194 919 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 DSC2Q02487 901 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 DUSP2Q05923 314 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 TBR1Q16650 682 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 MAP9Q49MG5 647 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 KRT40Q6A162 431 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 CHST15Q7LFX5 561 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 SRGAP1Q7Z6B7 1085 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 DRC7Q8IY82 874 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 PQLC1Q8N2U9 271 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 OR14K1Q8NGZ2 314 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 NSUN6Q8TEA1 469 aaKnown RBP5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 TIFAQ96CG3 184 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 UHRF1Q96T88 793 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 TMEM60Q9H2L4 133 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 KMT5AQ9NQR1 393 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 LANCL2Q9NS86 450 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 GPRC5DQ9NZD1 345 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 NR2E1Q9Y466 385 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 PCDHB1Q9Y5F3 818 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 SLC4A7Q9Y6M7 1214 aa5.55□□□□□ -1.52
HMGB1P16-201ENST00000447155 PMS2P1A4D2B8 440 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 TUSC2O75896 110 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 UBXN7O94888 489 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 MAP4K4O95819 1239 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 ALDH2P05091 517 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 TRIM27P14373 513 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 SREBF1P36956 1147 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 KCNC1P48547 511 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 ADAM8P78325 824 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 BORAQ6PGQ7 559 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 KSR2Q6VAB6 950 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 OVCH2Q7RTZ1 564 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 ZDHHC14Q8IZN3 488 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 LILRA3Q8N6C8 439 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 ANKRD53Q8N9V6 530 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 PPP1R35Q8TAP8 253 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 RGMAQ96B86 450 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 PKNOX2Q96KN3 472 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 SARGQ9BW04 601 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 POLHQ9Y253 713 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 SMARCA2P51531 1590 aa5.54□□□□□ -1.52
HMGB1P16-201ENST00000447155 CEP164Q9UPV0 1460 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 FAM227AF5H4B4 570 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 B3GALT2O43825 422 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 NOBOXO60393 691 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 ITGA10O75578 1167 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 ARIH2O95376 493 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 FTLP02792 175 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 HRGP04196 525 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 ANP32AP39687 249 aaKnown RBP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 MAP2K6P52564 334 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 TARDBPQ13148 414 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 GALEQ14376 348 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 RAB39AQ14964 217 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 ZNF124Q15973 351 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 RNF151Q2KHN1 245 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 CYB5RLQ6IPT4 315 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 PLEKHH3Q7Z736 793 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 RSPH3Q86UC2 560 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 CMTM4Q8IZR5 234 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 FAM43AQ8N2R8 423 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 C3orf20Q8ND61 904 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 RABGGTAQ92696 567 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 RPL10LQ96L21 214 aaKnown RBP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 CDC5LQ99459 802 aaKnown RBP5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 CGRRF1Q99675 332 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 MSL2Q9HCI7 577 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 CALCOCO1Q9P1Z2 691 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 VPS8Q8N3P4 1428 aa5.53□□□□□ -1.52
HMGB1P16-201ENST00000447155 CUX2O14529 1486 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 A6NNZ2 444 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 ADCY6O43306 1168 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 SLC26A4O43511 780 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 B4GALT3O60512 393 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 B4GALT4O60513 344 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZBED1O96006 694 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 MYBP10242 640 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 HTR1BP28222 390 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 GUCY1A2P33402 732 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 HK3P52790 923 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 USP14P54578 494 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 RAC3P60763 192 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 PPP4R4Q6NUP7 873 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 SP8Q8IXZ3 490 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 LGI4Q8N135 537 aa5.52□□□□□ -1.53
HMGB1P16-201ENST00000447155 CCHCR1Q8TD31 782 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms