RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.183e-8■□□□□ 8.2
CPNE1-215ENST00000437100 CAMK4Q16566 473 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 CLLU1OSQ5K130 101 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-215ENST00000437100 RBM43Q6ZSC3 357 aaKnown RBP16.17■□□□□ 0.18
CPNE1-215ENST00000437100 BICD1Q96G01 975 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 KCTD10Q9H3F6 313 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 KIAA1468Q9P260 1216 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 ANKFY1Q9P2R3 1169 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 HES2Q9Y543 173 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 PCDHB7Q9Y5E2 793 aa16.17■□□□□ 0.18
CPNE1-215ENST00000437100 CLDN3O15551 220 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 FGFR1P11362 822 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 GRM5P41594 1212 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 MORC3Q14149 939 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 KNOP1Q1ED39 458 aaKnown RBP16.16■□□□□ 0.18
CPNE1-215ENST00000437100 TMEM132AQ24JP5 1023 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-215ENST00000437100 GUF1Q8N442 669 aaKnown RBP16.16■□□□□ 0.18
CPNE1-215ENST00000437100 CEP120Q8N960 986 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 TMEM174Q8WUU8 243 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 RSPH1Q8WYR4 309 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 LPPQ93052 612 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 PGBD4Q96DM1 585 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 RAD9AQ99638 391 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 GTPBP4Q9BZE4 634 aaKnown RBP16.16■□□□□ 0.18
CPNE1-215ENST00000437100 GIT1Q9Y2X7 761 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 PCDHA11Q9Y5I1 949 aa16.16■□□□□ 0.18
CPNE1-215ENST00000437100 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-215ENST00000437100 HOXA2O43364 376 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 OFD1O75665 1012 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 UPP2O95045 317 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 PTMSP20962 102 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 GARTP22102 1010 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 GATMP50440 423 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 RABGGTBP53611 331 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 SNRPFP62306 86 aaKnown RBP16.15■□□□□ 0.18
CPNE1-215ENST00000437100 SLFN12LQ6IEE8 588 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 ZBTB33Q86T24 672 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 NELFCDQ8IXH7 590 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 C12orf56Q8IXR9 622 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 SMYD4Q8IYR2 804 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-215ENST00000437100 CMTR2Q8IYT2 770 aaKnown RBP16.15■□□□□ 0.18
CPNE1-215ENST00000437100 TRIML1Q8N9V2 468 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 CASD1Q96PB1 797 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 PBX4Q9BYU1 374 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 TRIM6Q9C030 488 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-215ENST00000437100 GBP3Q9H0R5 595 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 RSAD1Q9HA92 442 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 UBN1Q9NPG3 1134 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 AGPAT3Q9NRZ7 376 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 YBX2Q9Y2T7 364 aaKnown RBP16.15■□□□□ 0.18
CPNE1-215ENST00000437100 INSL6Q9Y581 213 aa16.15■□□□□ 0.18
CPNE1-215ENST00000437100 TLL1O43897 1013 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 RECQL4O94761 1208 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 LINC00271P0C7V0 271 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 ITGA4P13612 1032 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 PBX2P40425 430 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 XKR4Q5GH76 650 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 ZBTB41Q5SVQ8 909 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 FAM117BQ6P1L5 589 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 TMEM192Q8IY95 271 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 HACE1Q8IYU2 909 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 SYCP3Q8IZU3 236 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 GSTCDQ8NEC7 633 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 CBWD1Q9BRT8 395 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 TCHPQ9BT92 498 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 TMEM117Q9H0C3 514 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 SNTG2Q9NY99 539 aa16.14■□□□□ 0.17
CPNE1-215ENST00000437100 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
CPNE1-215ENST00000437100 LCHNA4D1U4 455 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 OGTO15294 1046 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 ARHGEF15O94989 841 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 ADRB2P07550 413 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 MYOGP15173 224 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 AKAP5P24588 427 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 PRCPP42785 496 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 AFF1P51825 1210 aaKnown RBP16.13■□□□□ 0.17
CPNE1-215ENST00000437100 POU5F1Q01860 360 aaKnown RBP16.13■□□□□ 0.17
CPNE1-215ENST00000437100 RAB30Q15771 203 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 NFIL3Q16649 462 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 KYAT1Q16773 422 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 KLHL40Q2TBA0 621 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 ZCWPW2Q504Y3 356 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 ALKAL1Q6UXT8 129 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 MSTO1Q9BUK6 570 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
CPNE1-215ENST00000437100 TMEM63CQ9P1W3 806 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
CPNE1-215ENST00000437100 TRAF3IP3Q9Y228 551 aa16.13■□□□□ 0.17
CPNE1-215ENST00000437100 SOX1O00570 391 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-215ENST00000437100 PDXKO00764 312 aa16.12■□□□□ 0.17
CPNE1-215ENST00000437100 KIAA0391O15091 583 aaKnown RBP16.12■□□□□ 0.17
CPNE1-215ENST00000437100 KIF20AO95235 890 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms