RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 MMP3P08254 477 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 CST5P28325 142 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 PRPHP41219 470 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 TECP42680 631 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 CHMP4BP1P59074 171 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ACTR2P61160 394 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ATP2C1P98194 919 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 BEX3Q00994 111 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 SP2Q02086 613 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ITGB3BPQ13352 177 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 LRRC41Q15345 812 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 PRRT3Q5FWE3 981 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ARL6IP4Q66PJ3 421 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 HAUS3Q68CZ6 603 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 DRC7Q8IY82 874 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 CKAP2LQ8IYA6 745 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ACRBPQ8NEB7 543 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 RDM1Q8NG50 284 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 RASSF8Q8NHQ8 419 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ERMNQ8TAM6 284 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ETNPPLQ8TBG4 499 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 GLG1Q92896 1179 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 LENG9Q96B70 501 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 GLT1D1Q96MS3 346 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 MTMR9Q96QG7 549 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 USP28Q96RU2 1077 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 GPR20Q99678 358 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 MTG1Q9BT17 334 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 KATNAL1Q9BW62 490 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 BRINP2Q9C0B6 783 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 TMEM60Q9H2L4 133 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 UNC45AQ9H3U1 944 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 SMARCAD1Q9H4L7 1026 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 KCNMB3Q9NPA1 279 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 DISC1Q9NRI5 854 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 ZNF215Q9UL58 517 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 OGDHLQ9ULD0 1010 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 CEP83Q9Y592 693 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 PCDHA10Q9Y5I2 948 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 CLIC4Q9Y696 253 aa6.86□□□□□ -1.31
ECHDC1-208ENST00000436638 LRRC37A2A6NM11 1700 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 VWA3AA6NCI4 1184 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 FAM229AH3BQW9 127 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SPTLC2O15270 562 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 DHX15O43143 795 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ADCY6O43306 1168 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 PSMD10O75832 226 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 GHRHP01286 108 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ASGR1P07306 291 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 TPM2P07951 284 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SUPT20HL2P0C7V6 817 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 NID1P14543 1247 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 CD53P19397 219 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 PTGS1P23219 599 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 MARCKSP29966 332 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ATICP31939 592 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 TCF7P36402 384 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 STAT5BP51692 787 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 AFF1P51825 1210 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 TERF1P54274 439 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 NAP1L1P55209 391 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 NKX3-2P78367 333 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 PPP2R5CQ13362 524 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SLC39A14Q15043 492 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 EPHA7Q15375 998 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 KCNA10Q16322 511 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 HSDL1Q3SXM5 330 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 TMEM63BQ5T3F8 832 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 KRT79Q5XKE5 535 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 KLHL10Q6JEL2 608 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SWSAP1Q6NVH7 229 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ZNF438Q7Z4V0 828 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 KLHDC9Q8NEP7 349 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 NEK9Q8TD19 979 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 KCNG4Q8TDN1 519 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 HAS1Q92839 578 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ATP6V0A1Q93050 837 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 GJA10Q969M2 543 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 CDK5RAP3Q96JB5 506 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 CCDC43Q96MW1 224 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ARPC5LQ9BPX5 153 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 LPIN3Q9BQK8 851 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SENP6Q9GZR1 1112 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SCAND2PQ9GZW5 306 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SMG9Q9H0W8 520 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 STARD7Q9NQZ5 370 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ZNF302Q9NR11 478 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 LRWD1Q9UFC0 647 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 SFMBT1Q9UHJ3 866 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 G3BP2Q9UN86 482 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 ZDHHC9Q9Y397 364 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 KIAA1217Q5T5P2 1943 aa6.85□□□□□ -1.31
ECHDC1-208ENST00000436638 GSTTP1A0A1W2PQM5 241 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 MYADML2A6NDP7 307 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CTAGE5O15320 804 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms