RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 MBIPQ9NS73 344 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 HYPKQ9NX55 129 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 TRHDEQ9UKU6 1024 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 AGO2Q9UKV8 859 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 C19orf53Q9UNZ5 99 aaPredicted RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 GPR34Q9UPC5 381 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 ATP11BQ9Y2G3 1177 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 FRMPD2Q68DX3 1309 aaPredicted RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 A0A1W2PRU2 124 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 XPOTO43592 962 aaKnown RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 TSPAN3O60637 253 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 SLC22A3O75751 556 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 DGKIO75912 1065 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 MICAL2O94851 1124 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 GOSR1O95249 250 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 HSPA4LO95757 839 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 ADH1CP00326 375 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 INHAP05111 366 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 S100A6P06703 90 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 CPEP16870 476 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 HDCP19113 662 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 TFEBP19484 476 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 EN2P19622 333 aaPredicted RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 LPOP22079 712 aaPredicted RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 PSMA4P25789 261 aaKnown RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 RDXP35241 583 aaKnown RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 MCM2P49736 904 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 ADCY1Q08828 1119 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 SREBF2Q12772 1141 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 IKQ13123 557 aaPredicted RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.448e-8■□□□□ 10.9
RFC3-202ENST00000434425 MTERF2Q49AM1 385 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 TMEM67Q5HYA8 995 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 FKBP15Q5T1M5 1219 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 HHATQ5VTY9 493 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 C1orf53Q5VUE5 145 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 SPRYD7Q5W111 196 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 INTS3Q68E01 1043 aaKnown RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 NUP54Q7Z3B4 507 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 DGLUCYQ7Z3D6 616 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 GPR155Q7Z3F1 870 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 KDELC2Q7Z4H8 507 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 GALNTL5Q7Z4T8 443 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 TXNRD3Q86VQ6 643 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 RPAP2Q8IXW5 612 aaPredicted RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 SLC30A5Q8TAD4 765 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 UTP15Q8TED0 518 aaKnown RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 GIMAP5Q96F15 307 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 SHDQ96IW2 340 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 UBXN10Q96LJ8 280 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 NAP1L3Q99457 506 aaPredicted RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 ZPBPQ9BS86 351 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 SAP130Q9H0E3 1048 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 PUS7LQ9H0K6 701 aaKnown RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 TNMDQ9H2S6 317 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 BRD9Q9H8M2 597 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 ABCB6Q9NP58 842 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 ANLNQ9NQW6 1124 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 CCPG1Q9ULG6 757 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 HPCAL4Q9UM19 191 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 MINPP1Q9UNW1 487 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 HCN4Q9Y3Q4 1203 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 SNX8Q9Y5X2 465 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 USP3Q9Y6I4 520 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 GAKO14976 1311 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 XDHP47989 1333 aa6.03□□□□□ -1.44
RFC3-202ENST00000434425 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
RFC3-202ENST00000434425 ARPC4-TTLL3A0A0A6YYG9 625 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 CACNB4O00305 520 aaPredicted RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 CAPN9O14815 690 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ZNF609O15014 1411 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 TSC22D2O75157 780 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ERLIN1O75477 346 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 PCCAP05165 728 aaPredicted RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 COL6A2P12110 1019 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 TRIM21P19474 475 aaKnown RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 IGFBP4P22692 258 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 EIF4BP23588 611 aaKnown RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 NF2P35240 595 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 HNF4AP41235 474 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ATXN1P54253 815 aaKnown RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 CAP1Q01518 475 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 UBXN1Q04323 297 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 CDC16Q13042 620 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ODF1Q14990 250 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ASIC2Q16515 512 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 PTPN21Q16825 1174 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ZNF423Q2M1K9 1284 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 C15orf59Q2T9L4 293 aaPredicted RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 TWISTNBQ3B726 338 aaPredicted RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 KBTBD12Q3ZCT8 623 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 PRR16Q569H4 304 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 SH2D4BQ5SQS7 431 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 METTL11BQ5VVY1 283 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 KAZNQ674X7 775 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 ALKBH5Q6P6C2 394 aaKnown RBP6.02□□□□□ -1.44
RFC3-202ENST00000434425 GBP6Q6ZN66 633 aa6.02□□□□□ -1.44
RFC3-202ENST00000434425 OTOP1Q7RTM1 612 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms