RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CEP120Q8N960 986 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 CNNM3Q8NE01 707 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 KIFAP3Q92845 792 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 CCDC51Q96ER9 411 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 ZBTB45Q96K62 511 aaPredicted RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 USP28Q96RU2 1077 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 ENTPD7Q9NQZ7 604 aa14.06□□□□□ -0.16
GPC1-204ENST00000426280 PUF60Q9UHX1 559 aaKnown RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 PRG3Q9Y2Y8 225 aaPredicted RBP14.06□□□□□ -0.16
GPC1-204ENST00000426280 CCDC169A6NNP5 214 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 ABLIM1O14639 778 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 LILRB3O75022 631 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 ALDH2P05091 517 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 PPM1AP35813 382 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 NDUFV1P49821 464 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 MCM6Q14566 821 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 NAB2Q15742 525 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 MAPK6Q16659 721 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 URGCPQ8TCY9 931 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 B3GALT6Q96L58 329 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 PRIMPOLQ96LW4 560 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 TARS2Q9BW92 718 aaKnown RBP14.05□□□□□ -0.16
GPC1-204ENST00000426280 C2orf40Q9H1Z8 148 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 S1PR5Q9H228 398 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 PTPRHQ9HD43 1115 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 ARHGAP28Q9P2N2 729 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 CD207Q9UJ71 328 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 FAN1Q9Y2M0 1017 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 GIT1Q9Y2X7 761 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 STK24Q9Y6E0 443 aa14.05□□□□□ -0.16
GPC1-204ENST00000426280 K7ERI5 159 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 NCK2O43639 380 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 CTSAP10619 480 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 PLCG1P19174 1290 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 GUCY2CP25092 1073 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 NCBP1Q09161 790 aaKnown RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 SMAD2Q15796 467 aaKnown RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 RNF168Q8IYW5 571 aaPredicted RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 C12orf76Q8N812 135 aaPredicted RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 IFT74Q96LB3 600 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 ACO2Q99798 780 aaKnown RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 TMEM175Q9BSA9 504 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 NTPCRQ9BSD7 190 aaKnown RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 TRIM6Q9C030 488 aaPredicted RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 HAPLN2Q9GZV7 340 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 NGRNQ9NPE2 291 aaKnown RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 KANSL3Q9P2N6 904 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 TFIP11Q9UBB9 837 aaKnown RBP14.04□□□□□ -0.16
GPC1-204ENST00000426280 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
GPC1-204ENST00000426280 A0A087X0B3 334 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 N4BP3O15049 544 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 RECQL4O94761 1208 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 EPCAMP16422 314 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 UBA7P41226 1012 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 OR1G1P47890 313 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 ZP2Q05996 745 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 COASYQ13057 564 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 GIT2Q14161 759 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 SMC1AQ14683 1233 aaKnown RBP14.03□□□□□ -0.16
GPC1-204ENST00000426280 PPP2R5AQ15172 486 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 PTPN14Q15678 1187 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 SEZ6Q53EL9 994 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
GPC1-204ENST00000426280 ANKRD54Q6NXT1 300 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 CD300LGQ6UXG3 332 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 TMEM161BQ8NDZ6 487 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 SLC22A17Q8WUG5 538 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 AK8Q96MA6 479 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 FAM193BQ96PV7 902 aaPredicted RBP14.03□□□□□ -0.16
GPC1-204ENST00000426280 PANK2Q9BZ23 570 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 CDT1Q9H211 546 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 TMEM134Q9H6X4 195 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 UBN1Q9NPG3 1134 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 KMT5AQ9NQR1 393 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 USP15Q9Y4E8 981 aaPredicted RBP14.03□□□□□ -0.16
GPC1-204ENST00000426280 HCFC2Q9Y5Z7 792 aa14.03□□□□□ -0.16
GPC1-204ENST00000426280 CNPP09543 421 aaKnown RBP14.02□□□□□ -0.17
GPC1-204ENST00000426280 WEE2P0C1S8 567 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 MYBP10242 640 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 PLS3P13797 630 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 CA8P35219 290 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 LONP1P36776 959 aaKnown RBP14.02□□□□□ -0.17
GPC1-204ENST00000426280 EFNA5P52803 228 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 OSTNP61366 133 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 SMAD4Q13485 552 aaKnown RBP14.02□□□□□ -0.17
GPC1-204ENST00000426280 GLRA4Q5JXX5 417 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 GPBP1Q86WP2 473 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 GJD3Q8N144 294 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 SMRP1Q8NCR6 262 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 RAD54LQ92698 747 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 CHAMP1Q96JM3 812 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 KLHL5Q96PQ7 755 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms