RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CD151P48509 253 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 MTFR1Q15390 333 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 ZCWPW2Q504Y3 356 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 MDH1BQ5I0G3 518 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 CFAP157Q5JU67 520 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 FAM182AQ5T1J6 154 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 DAB2IPQ5VWQ8 1189 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 GALNT17Q6IS24 598 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 RDH13Q8NBN7 331 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 ABTB1Q969K4 478 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 NMD3Q96D46 503 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 LRMDAQ9H2I8 198 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 NKIRAS1Q9NYS0 192 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 NAALADL1Q9UQQ1 740 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 USP20Q9Y2K6 914 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 NUP98P52948 1817 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 RASA4BC9J798 803 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 RASA4O43374 803 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 TJP3O95049 919 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 PENKP01210 267 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 TNNI2P48788 182 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 POLGP54098 1239 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 SLFN11Q7Z7L1 901 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 SESTD1Q86VW0 696 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 SLC25A41Q8N5S1 370 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 CCDC87Q9NVE4 849 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 BARHL2Q9NY43 387 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 CHMP2BQ9UQN3 213 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 KLRF2D3W0D1 207 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 POC1B-GALNT4F8VUJ3 575 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 THAP12O43422 761 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 USP1O94782 785 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 OR6B1O95007 311 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 FGFR1P11362 822 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 FAM182BQ5T319 152 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 NSMFQ6X4W1 530 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 MKL1Q969V6 931 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 DNAJC19Q96DA6 116 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 NAP1L3Q99457 506 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 SLX1AQ9BQ83 275 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 DCP1AQ9NPI6 582 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 CTTNBP2NLQ9P2B4 639 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 RASAL2Q9UJF2 1139 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 TNS1Q9HBL0 1735 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 A0A0G2JND7 137 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 O00370 1275 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 ONECUT3O60422 494 aaPredicted RBP12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 PFDN1O60925 122 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 AKAP3O75969 853 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 RARGP13631 454 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 VCAM1P19320 739 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 KLRK1P26718 216 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 BPIFB4P59827 614 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 UBE2SQ16763 222 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 KRT79Q5XKE5 535 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 EPM2AIP1Q7L775 607 aaPredicted RBP12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 AK8Q96MA6 479 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 PIGSQ96S52 555 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 EDEM3Q9BZQ6 932 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 POTECB2RU33 542 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 BAG2O95816 211 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 VHLP40337 213 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 STAT3P40763 770 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 RTP1P59025 263 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 SFSWAPQ12872 951 aaKnown RBP12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 CALCOCO2Q13137 446 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 VPS72Q15906 364 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 HS2ST1Q7LGA3 356 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 CADM1Q9BY67 442 aaKnown RBP12.06□□□□□ -0.48
SEC61A1-202ENST00000424880 PVALEFA0A1B0GWK0 134 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 GSTTP1A0A1W2PQM5 241 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CAMTA2O94983 1202 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 XRCC5P13010 732 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 PRDX5P30044 214 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CDR2Q01850 454 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 GIT2Q14161 759 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 P3H1Q32P28 736 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 LRRC74BQ6ZQY2 392 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 TTC1Q99614 292 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 RIC8AQ9NPQ8 531 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 FBXO6Q9NRD1 293 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms