RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 NLRP9Q7RTR0 991 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 COMMD2Q86X83 199 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 EXOSC4Q9NPD3 245 aaKnown RBP19.55■□□□□ 0.72
SHANK3-202ENST00000414786 LSM7Q9UK45 103 aaKnown RBP19.55■□□□□ 0.72
SHANK3-202ENST00000414786 POLRMTO00411 1230 aaKnown RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 ZNF589Q86UQ0 364 aaPredicted RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 PCDHB7Q9Y5E2 793 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 HPCAP84074 193 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 ROR1Q01973 937 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 DEUP1Q05D60 604 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 DIS3LQ8TF46 1054 aaKnown RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■■■ 114.4
SHANK3-202ENST00000414786 PLAAQ9Y263 795 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 FAM32AQ9Y421 112 aaKnown RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 ZNF711Q9Y462 761 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 GFPT1Q06210 699 aaPredicted RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 RSPH9Q9H1X1 276 aaPredicted RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 PLEKHA5Q9HAU0 1116 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 PAPOLBQ9NRJ5 636 aaKnown RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 NEK2P51955 445 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 CYGBQ8WWM9 190 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 C17orf80Q9BSJ5 609 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 LMBRD1Q9NUN5 540 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 SP100P23497 879 aaPredicted RBP19.54■□□□□ 0.72
SHANK3-202ENST00000414786 C16orf62Q7Z3J2 963 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 OOSP2Q86WS3 158 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 ZBED8Q8IZ13 594 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 BBS2Q9BXC9 721 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 TTLL13PA6NNM8 815 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 PFKFB2O60825 505 aa19.54■□□□□ 0.72
SHANK3-202ENST00000414786 TRIM49BA6NDI0 452 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 USP17L10C9JJH3 530 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 TPI1P60174 286 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 FKBP3Q00688 224 aaKnown RBP19.53■□□□□ 0.72
SHANK3-202ENST00000414786 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
SHANK3-202ENST00000414786 ZRANB3Q5FWF4 1079 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 SFR1Q86XK3 245 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 IPCEF1Q8WWN9 437 aaPredicted RBP19.53■□□□□ 0.72
SHANK3-202ENST00000414786 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 PDIA2Q13087 525 aaKnown RBP19.53■□□□□ 0.72
SHANK3-202ENST00000414786 NFKBIZQ9BYH8 718 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 GUCY2CP25092 1073 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
SHANK3-202ENST00000414786 DGKIO75912 1065 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 KRT37O76014 449 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 ZNF280CQ8ND82 737 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 C1orf54Q8WWF1 131 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 NEUROD4Q9HD90 331 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 AMHR2Q16671 573 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 PADI6Q6TGC4 694 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 SLC44A5Q8NCS7 719 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 MRPL42Q9Y6G3 142 aaKnown RBP19.53■□□□□ 0.72
SHANK3-202ENST00000414786 PLCL1Q15111 1095 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 CCDC33Q8N5R6 958 aa19.53■□□□□ 0.72
SHANK3-202ENST00000414786 KCNN4O15554 427 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 PCYT1AP49585 367 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 ATP6V1C1P21283 382 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 CDH6P55285 790 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 AGBL1Q96MI9 1066 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 IGFBP4P22692 258 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 FAM160B2Q86V87 743 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
SHANK3-202ENST00000414786 PYCARDQ9ULZ3 195 aa19.52■□□□□ 0.72
SHANK3-202ENST00000414786 PCCAP05165 728 aaPredicted RBP19.52■□□□□ 0.72
SHANK3-202ENST00000414786 GJC2Q5T442 439 aaPredicted RBP19.52■□□□□ 0.72
SHANK3-202ENST00000414786 C11orf57Q6ZUT1 292 aaPredicted RBP19.52■□□□□ 0.72
SHANK3-202ENST00000414786 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.52■□□□□ 0.72
SHANK3-202ENST00000414786 DBNLQ9UJU6 430 aaKnown RBP19.52■□□□□ 0.72
SHANK3-202ENST00000414786 NPHP3-ACAD11A0A0J9YXS1 232 aa19.52■□□□□ 0.71
SHANK3-202ENST00000414786 TYK2P29597 1187 aa19.52■□□□□ 0.71
SHANK3-202ENST00000414786 MLH1P40692 756 aa19.52■□□□□ 0.71
SHANK3-202ENST00000414786 RPS7P62081 194 aaKnown RBP19.52■□□□□ 0.71
SHANK3-202ENST00000414786 DDX39BQ13838 428 aaKnown RBP19.52■□□□□ 0.71
SHANK3-202ENST00000414786 ARHGAP17Q68EM7 881 aa19.52■□□□□ 0.71
SHANK3-202ENST00000414786 NEK9Q8TD19 979 aa19.52■□□□□ 0.71
SHANK3-202ENST00000414786 HMGCS2P54868 508 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 FAM162AQ96A26 154 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 FAM118BQ9BPY3 351 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 TSEN34Q9BSV6 310 aaKnown RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 PARVBQ9HBI1 364 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 MLNP12872 115 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 DNAJB2P25686 324 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 RNF149Q8NC42 400 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 SHCBP1LQ9BZQ2 653 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 CARMIL3Q8ND23 1372 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 NCK2O43639 380 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 EPHB4P54760 987 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 RASSF9O75901 435 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 GYS1P13807 737 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 CHRNA5P30532 468 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 SPARCL1Q14515 664 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 FUT11Q495W5 492 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 NAALADL2Q58DX5 795 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 ZSWIM5Q9P217 1185 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 TRIM33Q9UPN9 1127 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 A0A0G2JLW4 131 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 ANKS6Q68DC2 871 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 PTRHD1Q6GMV3 140 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms