RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ARHGEF38Q9NXL2 777 aa13.66□□□□□ -0.22
HERC3-203ENST00000407637 AJAP1Q9UKB5 411 aaPredicted RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 DIS3Q9Y2L1 958 aaKnown RBP13.66□□□□□ -0.22
HERC3-203ENST00000407637 PVALEFA0A1B0GWK0 134 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 M0R2N6 131 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 LAD1O00515 517 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 CCDC22O60826 627 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 VARSP26640 1264 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 GRB10Q13322 594 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 PRUNE1Q86TP1 453 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 VGLL2Q8N8G2 317 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 PCDH18Q9HCL0 1135 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 ARL8BQ9NVJ2 186 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 PCYOX1Q9UHG3 505 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 ANKRD36CQ5JPF3 1778 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 FAM47DPA6NHR8 397 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 GYG2O15488 501 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 EDF1O60869 148 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 MARCKSL1P49006 195 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 ADARP55265 1226 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 KYNUQ16719 465 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 RBM26Q5T8P6 1007 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 KLC3Q6P597 504 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 POP1Q99575 1024 aaKnown RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 NPHS2Q9NP85 383 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 TBC1D7Q9P0N9 293 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 GRID1Q9ULK0 1009 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 BARX2Q9UMQ3 279 aaPredicted RBP13.65□□□□□ -0.22
HERC3-203ENST00000407637 RREB1Q92766 1687 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
HERC3-203ENST00000407637 A0A1W2PRG0 241 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 ATP9BO43861 1147 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 ASMTLO95671 621 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 HARSP12081 509 aaKnown RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 ALAS1P13196 640 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 PHKG2P15735 406 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 KCNJ1P48048 391 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 PPATQ06203 517 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 CDC16Q13042 620 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 TMED2Q15363 201 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 TMEM63BQ5T3F8 832 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 CCDC105Q8IYK2 499 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 HELBQ8NG08 1087 aaPredicted RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 LNX1Q8TBB1 728 aaPredicted RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 CTNNBL1Q8WYA6 563 aaPredicted RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 RFFLQ8WZ73 363 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 EBF3Q9H4W6 596 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 SAR1AQ9NR31 198 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 INIPQ9NRY2 104 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 NAALADL1Q9UQQ1 740 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 RASA4BC9J798 803 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 BOLA2-SMG1P6H3BVE0 249 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 MAGEB2O15479 319 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 RASA4O43374 803 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 CYP11B2P19099 503 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 PRKCIP41743 596 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 CALCOCO2Q13137 446 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 SLC45A4Q5BKX6 768 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 DPY19L2P1Q6NXN4 242 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 DDX12PQ92771 950 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
HERC3-203ENST00000407637 GREM2Q9H772 168 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 NCANO14594 1321 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
HERC3-203ENST00000407637 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 TCRBV7S2A1N4TA0A589 114 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 CFAP69A5D8W1 941 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 USP1O94782 785 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 TMEM259Q4ZIN3 620 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 MFSD4BQ5TF39 518 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 TBC1D9BQ66K14 1250 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 GJB7Q6PEY0 223 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 KCNH5Q8NCM2 988 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 KRT35Q92764 455 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 ARHGEF26Q96DR7 871 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 DDX18Q9NVP1 670 aaKnown RBP13.63□□□□□ -0.23
HERC3-203ENST00000407637 THAP12O43422 761 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms