RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZNF280CQ8ND82 737 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 POMGNT1Q8WZA1 660 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 MFSD14AQ96MC6 490 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 RPS6KC1Q96S38 1066 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 ZSWIM1Q9BR11 485 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 TRIM51Q9BSJ1 452 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 DPH5Q9H2P9 285 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 TMBIM4Q9HC24 238 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 LCMT1Q9UIC8 334 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 FAM187AA6NFU0 413 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 STBD1O95210 358 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 MMEP08473 750 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 HSPA6P17066 643 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 NR1D1P20393 614 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 CTNNA1P35221 906 aaKnown RBP18.13■□□□□ 0.49
NUP50-203ENST00000407019 FMO1Q01740 532 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 CYP24A1Q07973 514 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 EMC10Q5UCC4 262 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 TTC19Q6DKK2 380 aaPredicted RBP18.13■□□□□ 0.49
NUP50-203ENST00000407019 FBXL13Q8NEE6 735 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 MCPH1Q8NEM0 835 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 MORC4Q8TE76 937 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 POP1Q99575 1024 aaKnown RBP18.13■□□□□ 0.49
NUP50-203ENST00000407019 TOPORSQ9NS56 1045 aaPredicted RBP18.13■□□□□ 0.49
NUP50-203ENST00000407019 RAB20Q9NX57 234 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 H0YGN5 161 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 MYO1CO00159 1063 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 MYZAPP0CAP1 466 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 CYP11B1P15538 503 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 PTPRAP18433 802 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 DSG3P32926 999 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 FLT3P36888 993 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 ATP1A2P50993 1020 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 PDE6CP51160 858 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 SOX10P56693 466 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 PDCLQ13371 301 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 DHX34Q14147 1143 aaKnown RBP18.12■□□□□ 0.49
NUP50-203ENST00000407019 MESDQ14696 234 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 TAS1R2Q8TE23 839 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 UBLCP1Q8WVY7 318 aaPredicted RBP18.12■□□□□ 0.49
NUP50-203ENST00000407019 KRT35Q92764 455 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 ERVK-5Q9HDB9 667 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 JPH1Q9HDC5 661 aaPredicted RBP18.12■□□□□ 0.49
NUP50-203ENST00000407019 SEPT9Q9UHD8 586 aaPredicted RBP18.12■□□□□ 0.49
NUP50-203ENST00000407019 ZNF112Q9UJU3 913 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 NFS1Q9Y697 457 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 NFASCO94856 1347 aa18.12■□□□□ 0.49
NUP50-203ENST00000407019 ATMINO43313 823 aaPredicted RBP18.11■□□□□ 0.49
NUP50-203ENST00000407019 DGAT1O75907 488 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 COMTP21964 271 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 RTP1P59025 263 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 CDR2Q01850 454 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 SWSAP1Q6NVH7 229 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 TMC3Q7Z5M5 1100 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 GPD1LQ8N335 351 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 BCAS4Q8TDM0 211 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ATP8B4Q8TF62 1192 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ZKSCAN4Q969J2 545 aaPredicted RBP18.11■□□□□ 0.49
NUP50-203ENST00000407019 CDHR1Q96JP9 859 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 WNT8AQ9H1J5 351 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ACP6Q9NPH0 428 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.11■□□□□ 0.49
NUP50-203ENST00000407019 CNOT7Q9UIV1 285 aaKnown RBP18.11■□□□□ 0.49
NUP50-203ENST00000407019 ZNF214Q9UL59 606 aaPredicted RBP18.11■□□□□ 0.49
NUP50-203ENST00000407019 PHIPQ8WWQ0 1821 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ADGRA3Q8IWK6 1321 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 HNRNPDLO14979 420 aaKnown RBP18.11■□□□□ 0.49
NUP50-203ENST00000407019 RGS20O76081 388 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 CYP1A2P05177 515 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 COPB2P35606 906 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 HMGCS2P54868 508 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ENPEPQ07075 957 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 SEL1L2Q5TEA6 688 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ZNF564Q8TBZ8 553 aaPredicted RBP18.11■□□□□ 0.49
NUP50-203ENST00000407019 ZNF653Q96CK0 615 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 TRIM31Q9BZY9 425 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 SLC9A2Q9UBY0 812 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 GTF3C4Q9UKN8 822 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 TRPC6Q9Y210 931 aa18.11■□□□□ 0.49
NUP50-203ENST00000407019 ARID2Q68CP9 1835 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 PHF2O75151 1096 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 GGPS1O95749 300 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 GARTP22102 1010 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 MARCKSL1P49006 195 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 PRKCEQ02156 737 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 ZNF844Q08AG5 666 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 KCTD19Q17RG1 926 aaPredicted RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 DUPD1Q68J44 220 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 AADACL2Q6P093 401 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 RUFY4Q6ZNE9 571 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms