RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.84■□□□□ 0.61
SNED1-204ENST00000401884 MTMR2Q13614 643 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 ATL2Q8NHH9 583 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 DDTLA6NHG4 134 aaPredicted RBP18.83■□□□□ 0.61
SNED1-204ENST00000401884 FOXN3O00409 490 aaPredicted RBP18.83■□□□□ 0.61
SNED1-204ENST00000401884 MAPK13O15264 365 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 PHF2O75151 1096 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 MYBL1P10243 752 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 EVX2Q03828 476 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 IZUMO3Q5VZ72 239 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 LRIG3Q6UXM1 1119 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 TRIM42Q8IWZ5 723 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 PRMT6Q96LA8 375 aaPredicted RBP18.83■□□□□ 0.61
SNED1-204ENST00000401884 ZDHHC15Q96MV8 337 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 SLC38A10Q9HBR0 1119 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 IP6K2Q9UHH9 426 aa18.83■□□□□ 0.61
SNED1-204ENST00000401884 UBE4BO95155 1302 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 WNT7AO00755 349 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 TFDP2Q14188 446 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 NSMCE1Q8WV22 266 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 TMEM39BQ9GZU3 492 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 ZNF446Q9NWS9 450 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 STRIP2Q9ULQ0 834 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.6
SNED1-204ENST00000401884 NUB1Q9Y5A7 615 aa18.83■□□□□ 0.6
SNED1-204ENST00000401884 ZBTB22O15209 634 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 PSMC6P62333 389 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 SPATA24Q86W54 205 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNED1-204ENST00000401884 ZNF473Q8WTR7 871 aaKnown RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 CPA5Q8WXQ8 436 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 MYCBPQ99417 103 aaPredicted RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 ATMINO43313 823 aaPredicted RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 COPB2P35606 906 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 IFRD2Q12894 506 aaPredicted RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 SNX25Q9H3E2 840 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 GIPC1O14908 333 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 CRCPO75575 148 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 CA8P35219 290 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 ARL8AQ96BM9 186 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 PSMC1P62191 440 aaKnown RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 NR1H3Q13133 447 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 MEA1Q16626 185 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 DUOXA2Q1HG44 320 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 XKR3Q5GH77 459 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 KCNK18Q7Z418 384 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 PDCD7Q8N8D1 485 aaKnown RBP18.82■□□□□ 0.6
SNED1-204ENST00000401884 CCT6BQ92526 530 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 THAP2Q9H0W7 228 aa18.82■□□□□ 0.6
SNED1-204ENST00000401884 IQANK1A0A1B0GTG1 560 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 PI4K2BG5E9Z4 385 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 CNGA1P29973 690 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 ZNF571Q7Z3V5 609 aaPredicted RBP18.81■□□□□ 0.6
SNED1-204ENST00000401884 DNAAF3Q8N9W5 541 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 CASKIN2Q8WXE0 1202 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 FAM163AQ96GL9 167 aaPredicted RBP18.81■□□□□ 0.6
SNED1-204ENST00000401884 TTC25Q96NG3 672 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 UBR1Q8IWV7 1749 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 SHMT1P34896 483 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 FUT2Q10981 343 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 GRIK5Q16478 980 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 TMEM143Q96AN5 459 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 FRMD3A2A2Y4 597 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 OSBPP22059 807 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
SNED1-204ENST00000401884 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNED1-204ENST00000401884 SPATA20Q8TB22 786 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 FAF2Q96CS3 445 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 MRPL4Q9BYD3 311 aaKnown RBP18.81■□□□□ 0.6
SNED1-204ENST00000401884 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 HEY1Q9Y5J3 304 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 GARSP41250 739 aaKnown RBP18.81■□□□□ 0.6
SNED1-204ENST00000401884 NXNQ6DKJ4 435 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 DNAAF5Q86Y56 855 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 TTC17Q96AE7 1141 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 CFAP36Q96G28 342 aa18.81■□□□□ 0.6
SNED1-204ENST00000401884 KRT7P08729 469 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 SLC1A1P43005 524 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 EPC2Q52LR7 807 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 C9orf72Q96LT7 481 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 PARVAQ9NVD7 372 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 PHF20L1A8MW92 1017 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 P4HA2O15460 535 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 KRT37O76014 449 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 HSD17B3P37058 310 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 COG2Q14746 738 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 NBPF9Q3BBW0 867 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 ZBED8Q8IZ13 594 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 OR6B3Q8NGW1 331 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 CYP2W1Q8TAV3 490 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 SCYL1Q96KG9 808 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 PCDHB2Q9Y5E7 798 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 AGTP01019 485 aa18.8■□□□□ 0.6
SNED1-204ENST00000401884 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
SNED1-204ENST00000401884 PDIA2Q13087 525 aaKnown RBP18.8■□□□□ 0.6
SNED1-204ENST00000401884 SLC30A10Q6XR72 485 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms