RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MED4Q9NPJ6 270 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 PASKQ96RG2 1323 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 IRS2Q9Y4H2 1338 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 GLI3P10071 1580 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 TISP43B9A030 160 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 ZNF280AP59817 542 aaPredicted RBP15.04■□□□□ -0
SCAF4-202ENST00000399804 VSNL1P62760 191 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 WDR72Q3MJ13 1102 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 MIIPQ5JXC2 388 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 KCTD16Q68DU8 428 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 NOA1Q8NC60 698 aaKnown RBP15.04■□□□□ -0
SCAF4-202ENST00000399804 FAM204AQ9H8W3 233 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 CAPN6Q9Y6Q1 641 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 SPDYE16A6NNV3 312 aaPredicted RBP15.04■□□□□ -0
SCAF4-202ENST00000399804 CCDC188H7C350 402 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 P4HA2O15460 535 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 CYP2C8P10632 490 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 CA8P35219 290 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 ALDH5A1P51649 535 aaPredicted RBP15.04■□□□□ -0
SCAF4-202ENST00000399804 CDK17Q00537 523 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 KRT81Q14533 505 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 OR6B2Q6IFH4 312 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 CPLX4Q7Z7G2 160 aa15.04■□□□□ -0
SCAF4-202ENST00000399804 LRRD1A4D1F6 860 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 EXTL3O43909 919 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 IVLP07476 585 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 HSPA6P17066 643 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 ITGB3BPQ13352 177 aaPredicted RBP15.03■□□□□ -0
SCAF4-202ENST00000399804 PPP1R2P3Q6NXS1 205 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 METTL7BQ6UX53 244 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 DNAAF5Q86Y56 855 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 GRK7Q8WTQ7 553 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 RSAD2Q8WXG1 361 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 CHORDC1Q9UHD1 332 aaPredicted RBP15.03■□□□□ -0
SCAF4-202ENST00000399804 E7EVH7 732 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 EPHB6O15197 1021 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 ATP2C2O75185 946 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 ATP2A2P16615 1042 aaKnown RBP15.03■□□□□ -0
SCAF4-202ENST00000399804 ANXA13P27216 316 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 HSD17B4P51659 736 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 TMEM62Q0P6H9 643 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 UAP1Q16222 522 aaPredicted RBP15.03■□□□□ -0
SCAF4-202ENST00000399804 TRIM50Q86XT4 487 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 OR6B3Q8NGW1 331 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 CLMNQ96JQ2 1002 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 PACSIN1Q9BY11 444 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 SNX25Q9H3E2 840 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 RNF225M0QZC1 329 aaPredicted RBP15.03■□□□□ -0
SCAF4-202ENST00000399804 TBC1D8O95759 1140 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 CLCN3P51790 818 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 FAM114A2Q9NRY5 505 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 SIK3Q9Y2K2 1263 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 ATP8A1Q9Y2Q0 1164 aa15.03■□□□□ -0
SCAF4-202ENST00000399804 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 EBAG9O00559 213 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 CAPN9O14815 690 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 RTN2O75298 545 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 ATP1A2P50993 1020 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 GTF2A2P52657 109 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 DR1Q01658 176 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 LAMC2Q13753 1193 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 TWF2Q6IBS0 349 aaKnown RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 CCDC60Q8IWA6 550 aaPredicted RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 COG1Q8WTW3 980 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 HEMGNQ9BXL5 484 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 GBA2Q9HCG7 927 aaPredicted RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 TOPORSQ9NS56 1045 aaPredicted RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 COX16Q9P0S2 106 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 COL20A1Q9P218 1284 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 A0A0U1RQJ8 604 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 KRT1P04264 644 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 TGFB3P10600 412 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 FAM71BQ8TC56 605 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 LRRC1Q9BTT6 524 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 GCOM2Q9BZD3 368 aaPredicted RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 IQCGQ9H095 443 aaKnown RBP15.02■□□□□ -0
SCAF4-202ENST00000399804 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 SCINQ9Y6U3 715 aa15.02■□□□□ -0
SCAF4-202ENST00000399804 MAGEB2O15479 319 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 ZRANB2O95218 330 aaKnown RBP eCLIP15.02□□□□□ -0.011e-6■■■■□ 23.3
SCAF4-202ENST00000399804 ATF2P15336 505 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 SCP2P22307 547 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 DYNLT1P63172 113 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 ZNF571Q7Z3V5 609 aaPredicted RBP15.02□□□□□ -0.01
SCAF4-202ENST00000399804 LRRN4CLQ8ND94 238 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 TAS1R2Q8TE23 839 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 MYH13Q9UKX3 1938 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 ECEL1O95672 775 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 DHX9Q08211 1270 aaKnown RBP15.02□□□□□ -0.01
SCAF4-202ENST00000399804 TRIP13Q15645 432 aaPredicted RBP15.02□□□□□ -0.01
SCAF4-202ENST00000399804 ATF7IP2Q5U623 682 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 CPA5Q8WXQ8 436 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.02□□□□□ -0.012e-15■■□□□ 11.9
SCAF4-202ENST00000399804 CALN1Q9BXU9 219 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 IKZF4Q9H2S9 585 aa15.02□□□□□ -0.01
SCAF4-202ENST00000399804 IGLV3-22A0A075B6J6 115 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 GOLGA6L7A0A1B0GV03 622 aa15.01□□□□□ -0.01
SCAF4-202ENST00000399804 NDUFAB1O14561 156 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms