RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 STXBP4Q6ZWJ1 553 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 MICALL2Q8IY33 904 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 SPIRE2Q8WWL2 714 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 FEZ2Q9UHY8 353 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-202ENST00000394888 JAK3P52333 1124 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 CUL1Q13616 776 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 SYCE1Q8N0S2 351 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 MCM3APO60318 1980 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 MYCLP12524 364 aaPredicted RBP16.61■□□□□ 0.25
CPSF7-202ENST00000394888 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 IFI16Q16666 785 aaKnown RBP16.61■□□□□ 0.25
CPSF7-202ENST00000394888 GLG1Q92896 1179 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 NR3C2P08235 984 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 CFHP08603 1231 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 SCYL3Q8IZE3 742 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 GPRASP2Q96D09 838 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 CNOT8Q9UFF9 292 aaKnown RBP16.61■□□□□ 0.25
CPSF7-202ENST00000394888 AMFRQ9UKV5 643 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 MYPNQ86TC9 1320 aa16.61■□□□□ 0.25
CPSF7-202ENST00000394888 FAM189A1O60320 539 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 PPFIA2O75334 1257 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 ATG7O95352 703 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 DSG3P32926 999 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 KRT76Q01546 638 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 CYP1B1Q16678 543 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 CCDC70Q6NSX1 233 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 ZSWIM1Q9BR11 485 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 NFASCO94856 1347 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
CPSF7-202ENST00000394888 PPP1R12BO60237 982 aaPredicted RBP16.6■□□□□ 0.25
CPSF7-202ENST00000394888 VNN1O95497 513 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 UNGP13051 313 aaPredicted RBP16.6■□□□□ 0.25
CPSF7-202ENST00000394888 CYP11B1P15538 503 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 SFNP31947 248 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 TGFB2P61812 414 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 NAA35Q5VZE5 725 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 C18orf8Q96DM3 657 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 TRIM7Q9C029 511 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 A1CFQ9NQ94 594 aaKnown RBP16.6■□□□□ 0.25
CPSF7-202ENST00000394888 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 RRP15Q9Y3B9 282 aaKnown RBP16.6■□□□□ 0.25
CPSF7-202ENST00000394888 RTN2O75298 545 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 PYGMP11217 842 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 FAM102BQ5T8I3 360 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 TAOK3Q9H2K8 898 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 SYNGAP1Q96PV0 1343 aa16.6■□□□□ 0.25
CPSF7-202ENST00000394888 DENND3A2RUS2 1198 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 COMTP21964 271 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 CTNNA1P35221 906 aaKnown RBP16.59■□□□□ 0.25
CPSF7-202ENST00000394888 MXI1P50539 228 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 LRIG3Q6UXM1 1119 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 SV2AQ7L0J3 742 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 PCYT2Q99447 389 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TMEM8AQ9HCN3 771 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 ADGRA2Q96PE1 1338 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 IGKV6D-21A0A0A0MT36 114 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 MYO1CO00159 1063 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 GZMAP12544 262 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
CPSF7-202ENST00000394888 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 ANKS1BQ7Z6G8 1248 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TMC2Q8TDI7 906 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TAF4BQ92750 862 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 ATP6V1G3Q96LB4 118 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 CAPS2Q9BXY5 557 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 GABBR1Q9UBS5 961 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 MROH7Q68CQ1 1323 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 LTBP3Q9NS15 1303 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TNFAIP3P21580 790 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 RPS12P25398 132 aaKnown RBP16.59■□□□□ 0.25
CPSF7-202ENST00000394888 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-202ENST00000394888 PDCLQ13371 301 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 ZBTB41Q5SVQ8 909 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 VPS36Q86VN1 386 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 CTNNBL1Q8WYA6 563 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-202ENST00000394888 PI4K2AQ9BTU6 479 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 TRPC6Q9Y210 931 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 PCDHA10Q9Y5I2 948 aa16.59■□□□□ 0.25
CPSF7-202ENST00000394888 HSF2BPO75031 334 aa16.58■□□□□ 0.25
CPSF7-202ENST00000394888 RTP1P59025 263 aa16.58■□□□□ 0.25
CPSF7-202ENST00000394888 TRPM4Q8TD43 1214 aa16.58■□□□□ 0.25
CPSF7-202ENST00000394888 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
CPSF7-202ENST00000394888 CATSPERGQ6ZRH7 1159 aa16.58■□□□□ 0.24
CPSF7-202ENST00000394888 LMBR1Q8WVP7 490 aa16.58■□□□□ 0.24
CPSF7-202ENST00000394888 DNAH12Q6ZR08 3092 aa16.58■□□□□ 0.24
CPSF7-202ENST00000394888 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-202ENST00000394888 SHBGP04278 402 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms