RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 GPBP1Q86WP2 473 aa20.68■□□□□ 0.9
TRPT1-202ENST00000394546 DNAJB4Q9UDY4 337 aa20.68■□□□□ 0.9
TRPT1-202ENST00000394546 TNFSF13BQ9Y275 285 aa20.68■□□□□ 0.9
TRPT1-202ENST00000394546 SFI1A8K8P3 1242 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 H3BQ06 376 aaPredicted RBP20.67■□□□□ 0.9
TRPT1-202ENST00000394546 SLC16A4O15374 487 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 DDHD2O94830 711 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 CXCL14O95715 111 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 ABCD1P33897 745 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 CA8P35219 290 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 SCNN1GP51170 649 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 AFF1P51825 1210 aaKnown RBP20.67■□□□□ 0.9
TRPT1-202ENST00000394546 GRIK3Q13003 919 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 DHX8Q14562 1220 aaKnown RBP20.67■□□□□ 0.9
TRPT1-202ENST00000394546 DUSP6Q16828 381 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 NT5DC1Q5TFE4 455 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 VPS52Q8N1B4 723 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 MRPL43Q8N983 215 aaKnown RBP20.67■□□□□ 0.9
TRPT1-202ENST00000394546 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.67■□□□□ 0.9
TRPT1-202ENST00000394546 LARP4BQ92615 738 aaKnown RBP20.67■□□□□ 0.9
TRPT1-202ENST00000394546 ZFP42Q96MM3 310 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 USP28Q96RU2 1077 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 COLEC11Q9BWP8 271 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 STK17AQ9UEE5 414 aa20.67■□□□□ 0.9
TRPT1-202ENST00000394546 MYO7AQ13402 2215 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 GRXCR2A6NFK2 248 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 TNFRSF10AO00220 468 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 NRP1O14786 923 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 FAM13AO94988 1023 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 ZSCAN22P10073 491 aaPredicted RBP20.66■□□□□ 0.9
TRPT1-202ENST00000394546 GTF2F1P35269 517 aaKnown RBP eCLIP20.66■□□□□ 0.9
TRPT1-202ENST00000394546 OR1G1P47890 313 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 NASPP49321 788 aaPredicted RBP20.66■□□□□ 0.9
TRPT1-202ENST00000394546 ARSHQ5FYA8 562 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 RRAGBQ5VZM2 374 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 COLGALT2Q8IYK4 626 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 EPSTI1Q96J88 318 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 ACO2Q99798 780 aaKnown RBP20.66■□□□□ 0.9
TRPT1-202ENST00000394546 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 BLOC1S4Q9NUP1 217 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 SNTG2Q9NY99 539 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 KLK14Q9P0G3 267 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 CD207Q9UJ71 328 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 SSX2IPQ9Y2D8 614 aa20.66■□□□□ 0.9
TRPT1-202ENST00000394546 TTLL13PA6NNM8 815 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 PER2O15055 1255 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 TBCAO75347 108 aaKnown RBP20.65■□□□□ 0.9
TRPT1-202ENST00000394546 CTSAP10619 480 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 LTBRP36941 435 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 DSC1Q08554 894 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 MCM6Q14566 821 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 SPECC1Q5M775 1068 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 ATL3Q6DD88 541 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 CCDC73Q6ZRK6 1079 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 MYCT1Q8N699 235 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 CCDC94Q9BW85 323 aaPredicted RBP20.65■□□□□ 0.9
TRPT1-202ENST00000394546 ZBP1Q9H171 429 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 PARVGQ9HBI0 331 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 PCDHGC5Q9Y5F6 944 aa20.65■□□□□ 0.9
TRPT1-202ENST00000394546 PLXNA4Q9HCM2 1894 aa20.64■□□□□ 0.9
TRPT1-202ENST00000394546 SPTBN5Q9NRC6 3674 aaKnown RBP20.64■□□□□ 0.9
TRPT1-202ENST00000394546 CUL9Q8IWT3 2517 aa20.64■□□□□ 0.9
TRPT1-202ENST00000394546 XIRP2A4UGR9 3374 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 NPHP3-ACAD11A0A0J9YXS1 232 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 C2orf71A6NGG8 1288 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 HIDE1A8MVS5 230 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 SPTLC2O15270 562 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 LINC01565O15544 149 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 PPP6R2O75170 966 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 THP07101 528 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 YARSP54577 528 aaKnown RBP20.64■□□□□ 0.89
TRPT1-202ENST00000394546 ZNF568Q3ZCX4 644 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 EEF1DP3Q658K8 133 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 LINC00301Q8NCQ3 95 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 TMEM161BQ8NDZ6 487 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 CLIC6Q96NY7 704 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 REEP2Q9BRK0 252 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 TOPORSQ9NS56 1045 aaPredicted RBP20.64■□□□□ 0.89
TRPT1-202ENST00000394546 MIOSQ9NXC5 875 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 USP20Q9Y2K6 914 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 IRAK3Q9Y616 596 aa20.64■□□□□ 0.89
TRPT1-202ENST00000394546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.63■□□□□ 0.89
TRPT1-202ENST00000394546 RECQL4O94761 1208 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 YEATS4O95619 227 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 MAPTP10636 758 aaKnown RBP20.63■□□□□ 0.89
TRPT1-202ENST00000394546 MCF2P10911 925 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 COASYQ13057 564 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 SMAD4Q13485 552 aaKnown RBP20.63■□□□□ 0.89
TRPT1-202ENST00000394546 MPZL3Q6UWV2 235 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 SV2BQ7L1I2 683 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 TMEM173Q86WV6 379 aaPredicted RBP20.63■□□□□ 0.89
TRPT1-202ENST00000394546 SPRYD3Q8NCJ5 442 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 GSTCDQ8NEC7 633 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 CASP10Q92851 521 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 TARS2Q9BW92 718 aaKnown RBP20.63■□□□□ 0.89
TRPT1-202ENST00000394546 EMILIN2Q9BXX0 1053 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 ZHX3Q9H4I2 956 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 CFAP45Q9UL16 551 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 GDAQ9Y2T3 454 aa20.63■□□□□ 0.89
TRPT1-202ENST00000394546 PRG3Q9Y2Y8 225 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms