RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 APBA1Q02410 837 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 FSTL1Q12841 308 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 SMN1Q16637 294 aaKnown RBP4.78□□□□□ -1.64
TRAV40-201ENST00000390467 UGT8Q16880 541 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 C19orf54Q5BKX5 351 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 PRAMEF14Q5SWL7 426 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 DDX46Q7L014 1031 aaKnown RBP4.78□□□□□ -1.64
TRAV40-201ENST00000390467 RNF169Q8NCN4 708 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 PROKR1Q8TCW9 393 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 TSPEARQ8WU66 669 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 TGFBRAP1Q8WUH2 860 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 GPRC5DQ9NZD1 345 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 FZD1Q9UP38 647 aa4.78□□□□□ -1.64
TRAV40-201ENST00000390467 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 TLDC2A0PJX2 215 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 GRID2IPA4D2P6 1211 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 PRR5-ARHGAP8B1AHC4 643 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 ZEB2O60315 1214 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 ABHD16AO95870 558 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 PROZP22891 400 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 CCT2P78371 535 aaKnown RBP4.77□□□□□ -1.65
TRAV40-201ENST00000390467 MST1LQ2TV78 715 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 MFSD14BQ5SR56 506 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 MBNL2Q5VZF2 373 aaKnown RBP4.77□□□□□ -1.65
TRAV40-201ENST00000390467 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 LHFPL2Q6ZUX7 228 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 SYNE4Q8N205 404 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 AFAP1L2Q8N4X5 818 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 REPS2Q8NFH8 660 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 OR10H5Q8NGA6 315 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 ZNF480Q8WV37 535 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 CDC5LQ99459 802 aaKnown RBP4.77□□□□□ -1.65
TRAV40-201ENST00000390467 QRSL1Q9H0R6 528 aaKnown RBP4.77□□□□□ -1.65
TRAV40-201ENST00000390467 TRPM5Q9NZQ8 1165 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 KCNG1Q9UIX4 513 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 HDAC5Q9UQL6 1122 aa4.77□□□□□ -1.65
TRAV40-201ENST00000390467 B5MCH6 92 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 ULK1O75385 1050 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 NCR1O76036 304 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 RECQL4O94761 1208 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 HSP90B1P14625 803 aaKnown RBP4.76□□□□□ -1.65
TRAV40-201ENST00000390467 ZSCAN20P17040 1043 aaPredicted RBP4.76□□□□□ -1.65
TRAV40-201ENST00000390467 RNASE9P60153 205 aaKnown RBP4.76□□□□□ -1.65
TRAV40-201ENST00000390467 CDK17Q00537 523 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 PURAQ00577 322 aaKnown RBP4.76□□□□□ -1.65
TRAV40-201ENST00000390467 STAT4Q14765 748 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 SDE2Q6IQ49 451 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 GDF7Q7Z4P5 450 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 FBXO18Q8NFZ0 1043 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 ACAP3Q96P50 834 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 NEU1Q99519 415 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 SLC46A2Q9BY10 475 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 CAAP1Q9H8G2 361 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 SPON1Q9HCB6 807 aa4.76□□□□□ -1.65
TRAV40-201ENST00000390467 ZNF185O15231 689 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 SOX5P35711 763 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 MASP1P48740 699 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 NHLH2Q02577 135 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 TIGD2Q4W5G0 525 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 LY6G5CQ5SRR4 150 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 DRICH1Q6PGQ1 229 aaPredicted RBP4.75□□□□□ -1.65
TRAV40-201ENST00000390467 Q6ZVL8 140 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 TRMT2AQ8IZ69 625 aaKnown RBP4.75□□□□□ -1.65
TRAV40-201ENST00000390467 BEND2Q8NDZ0 799 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 GPR150Q8NGU9 434 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 SLC35B2Q8TB61 432 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 LMBR1Q8WVP7 490 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 FAM193BQ96PV7 902 aaPredicted RBP4.75□□□□□ -1.65
TRAV40-201ENST00000390467 AKIP1Q9NQ31 210 aa4.75□□□□□ -1.65
TRAV40-201ENST00000390467 RPTORQ8N122 1335 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 TMEM191CA6NGB0 347 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 TBKBP1A7MCY6 615 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 EYA4O95677 639 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 GASTP01350 101 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 LAG3P18627 525 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 HSD3B2P26439 372 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 ADSLP30566 484 aaPredicted RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 CRHR1P34998 444 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 NANOS3P60323 173 aaKnown RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 TMPRSS15P98073 1019 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 ADRM1Q16186 407 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 BMT2Q1RMZ1 405 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 MUM1Q2TAK8 710 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 BEAN1Q3B7T3 259 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 PDCD4Q53EL6 469 aaKnown RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 TAF7LQ5H9L4 462 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 METRNLQ641Q3 311 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 IQSEC1Q6DN90 963 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 KCNK18Q7Z418 384 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 CHAC2Q8WUX2 184 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 RIN2Q8WYP3 895 aaPredicted RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 TFAP2CQ92754 450 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 HOXB13Q92826 284 aaPredicted RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 MYEOVQ96EZ4 313 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 RAX2Q96IS3 184 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 ORAI2Q96SN7 254 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 FAM126AQ9BYI3 521 aaPredicted RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 DMRT3Q9NQL9 472 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms