RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 MOV10L1Q9BXT6 1211 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 SPG21Q9NZD8 308 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 ZBTB7BO15156 539 aaPredicted RBP9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 OPA1O60313 960 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 SYCE1Q8N0S2 351 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 ATL2Q8NHH9 583 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 TRIM45Q9H8W5 580 aaPredicted RBP9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 STK17AQ9UEE5 414 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 PAMP19021 973 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 KLRC1P26715 233 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 DNM1Q05193 864 aaKnown RBP9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 CCDC144BQ3MJ40 725 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 OTOP3Q7RTS5 596 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 PLEKHA5Q9HAU0 1116 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 FAM207AQ9NSI2 230 aaPredicted RBP9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 PTPRAP18433 802 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 NPY2RP49146 381 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 PSMC6P62333 389 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 TAF11Q15544 211 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 GLRA4Q5JXX5 417 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 ANGPTL8Q6UXH0 198 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 ZNF438Q7Z4V0 828 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 MORC4Q8TE76 937 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 ELOVL2Q9NXB9 296 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 GUCA1BQ9UMX6 200 aa9.82□□□□□ -0.84
LIMCH1-202ENST00000381753 TRAV19A0A0A6YYK7 116 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 MYO1FO00160 1098 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 GRSF1Q12849 480 aaKnown RBP eCLIP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 EXOC3L4Q17RC7 722 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 FAM124AQ86V42 546 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 GPRASP2Q96D09 838 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KCNK9Q9NPC2 374 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 UBQLN1Q9UMX0 589 aaKnown RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 TLL2Q9Y6L7 1015 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 PHEXP78562 749 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 TOMM20Q15388 145 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 ALKBH2Q6NS38 261 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 LRRC43Q8N309 656 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KRT12Q99456 494 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 MAGEB5Q9BZ81 275 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 UBE2TQ9NPD8 197 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 RAD18Q9NS91 495 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 C6orf203Q9P0P8 240 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KLHL3Q9UH77 587 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 CFAP99D6REC4 459 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KRT15P19012 456 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 YWHAHQ04917 246 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 LY6KQ17RY6 165 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KIFC3Q9BVG8 833 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 POLMQ9NP87 494 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 APODP05090 189 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 TLE2Q04725 743 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KCNA10Q16322 511 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 DNERQ8NFT8 737 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 LZICQ8WZA0 190 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 VPS37BQ9H9H4 285 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 RSAD1Q9HA92 442 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 MOXD2PA6NHM9 499 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 ATP5BP06576 529 aaKnown RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 AMD1P17707 334 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 HSD17B4P51659 736 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 AP3M2P53677 418 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 RABGAP1LQ5R372 815 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 DEFB123Q8N688 67 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 ATP6V0D2Q8N8Y2 350 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 SLC7A14Q8TBB6 771 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 TRAIPQ9BWF2 469 aa9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 KLHL8Q9P2G9 620 aaPredicted RBP9.81□□□□□ -0.84
LIMCH1-202ENST00000381753 MCF2LO15068 1137 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 COBLO75128 1261 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 IFNA8P32881 189 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 GNL1P36915 607 aaPredicted RBP9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 TUFMP49411 452 aaKnown RBP9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 DYNLT1P63172 113 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 C12orf60Q5U649 245 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 DHX38Q92620 1227 aaKnown RBP9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 STRBPQ96SI9 672 aaKnown RBP9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 IRF2BPLQ9H1B7 796 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 SOHLH2Q9NX45 425 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 ARHGAP10A1A4S6 786 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 LRRN2O75325 713 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 SDC4P31431 198 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 CLCN3P51790 818 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 DGKEP52429 567 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 LRRC32Q14392 662 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 LRRC41Q15345 812 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 EPHA7Q15375 998 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 DARS2Q6PI48 645 aaKnown RBP9.8□□□□□ -0.84
LIMCH1-202ENST00000381753 RRAGAQ7L523 313 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms