RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ATP11CQ8NB49 1132 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 TTC17Q96AE7 1141 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PPCSQ9HAB8 311 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 CYP26B1Q9NR63 512 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 UVRAGQ9P2Y5 699 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PLAGL2Q9UPG8 496 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 APOBEC2Q9Y235 224 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 LTBP1Q14766 1721 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 ABCB11O95342 1321 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 TBX3O15119 743 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 MGEA5O60502 916 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 CDH16O75309 829 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PRLRP16471 622 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 CD58P19256 250 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 FGFR2P21802 821 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 SMARCA1P28370 1054 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 SLC1A1P43005 524 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 QARSP47897 775 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 CORO7P57737 925 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 ACTN3Q08043 901 aaPredicted RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 PRKG1Q13976 671 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PDE1CQ14123 709 aaPredicted RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 ATL2Q8NHH9 583 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 NSUN4Q96CB9 384 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 HEMGNQ9BXL5 484 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 TSPYL2Q9H2G4 693 aaPredicted RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 IP6K2Q9UHH9 426 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 L1RE1Q9UN81 338 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 CLRN2A0PK11 232 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 FAM205CA6NFA0 338 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 RTN2O75298 545 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 GH2P01242 217 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 EIF2AK2P19525 551 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 CDR2Q01850 454 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 TBC1D10BQ4KMP7 808 aaPredicted RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 NCAPG2Q86XI2 1143 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 TTLL6Q8N841 843 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 PDZD8Q8NEN9 1154 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 DEPDC1BQ8WUY9 529 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 FAF2Q96CS3 445 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 AGPAT1Q99943 283 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 SYT17Q9BSW7 474 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 UPF3AQ9H1J1 476 aaKnown RBP8.93□□□□□ -0.98
VPS36-201ENST00000378060 SNX25Q9H3E2 840 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 DBNDD1Q9H9R9 158 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 SUGT1Q9Y2Z0 365 aa8.93□□□□□ -0.98
VPS36-201ENST00000378060 COL1A1P02452 1464 aaPredicted RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 CHD4Q14839 1912 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 FAM107AO95990 144 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 UCHL3P15374 230 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 NCF2P19878 526 aaPredicted RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 ARFIP2P53365 341 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 EPHA7Q15375 998 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 GRAMD1BQ3KR37 738 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 FIGNQ5HY92 759 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ADGRF4Q8IZF3 695 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 TBC1D16Q8TBP0 767 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 DYDC2Q96IM9 177 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 NUDCD1Q96RS6 583 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 RPF1Q9H9Y2 349 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 SPC25Q9HBM1 224 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 TUFT1Q9NNX1 390 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ASNSD1Q9NWL6 643 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 DDX56Q9NY93 547 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 SPATA21Q7Z572 469 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ARHGAP18Q8N392 663 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 C3orf20Q8ND61 904 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 C11orf70Q9BRQ4 267 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ROPN1BQ9BZX4 212 aaPredicted RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 ECT2Q9H8V3 914 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ROPN1Q9HAT0 212 aaPredicted RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 LRRC4Q9HBW1 653 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 SMYD2Q9NRG4 433 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 INTUQ9ULD6 942 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 SMG5Q9UPR3 1016 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 COL4A5P29400 1685 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 KRT14P02533 472 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 STMN1P16949 149 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ITIH2P19823 946 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 GALCP54803 685 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 TAP1Q03518 808 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ITKQ08881 620 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 MTMR1Q13613 665 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 PLCB4Q15147 1175 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 LRRC23Q53EV4 343 aaPredicted RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 STYK1Q6J9G0 422 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ZC3H18Q86VM9 953 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 SH2D3CQ8N5H7 860 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 FBXL13Q8NEE6 735 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ZC3H15Q8WU90 426 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ANKS1AQ92625 1134 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 SPDL1Q96EA4 605 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 SGSM3Q96HU1 749 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 TIPINQ9BVW5 301 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms