RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 MAP7D1Q3KQU3 841 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 ENOSF1Q7L5Y1 443 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 C1orf54Q8WWF1 131 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 SSU72P8A0A1W2PR75 194 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 ATMINO43313 823 aaPredicted RBP19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 GBP1P32455 592 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 KLHDC7AQ5VTJ3 777 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 CENPPQ6IPU0 288 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 SMC1BQ8NDV3 1235 aa19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 GPBP1L1Q9HC44 474 aaPredicted RBP19.16■□□□□ 0.66
PTPDC1-202ENST00000375360 F5H423 210 aaPredicted RBP19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 PPFIA4O75335 1185 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 KLRC1P26715 233 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 PRPF31Q8WWY3 499 aaKnown RBP19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 CCT6BQ92526 530 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 ERGIC2Q96RQ1 377 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 GBA2Q9HCG7 927 aaPredicted RBP19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 MRFAP1Q9Y605 127 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 EIF3DO15371 548 aaKnown RBP eCLIP19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 AKAP3O75969 853 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 TJP3O95049 919 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 KIAA0895Q8NCT3 520 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 SLC35G2Q8TBE7 412 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 SYNGAP1Q96PV0 1343 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 MAGEB2O15479 319 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 DSG3P32926 999 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 NNTQ13423 1086 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 ZFYVE28Q9HCC9 887 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 DUSP10Q9Y6W6 482 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 WNT7AO00755 349 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 CYP2C8P10632 490 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 HOXD10P28358 340 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 TMED2Q15363 201 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 IER5Q5VY09 327 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 SMYD2Q9NRG4 433 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 PRKAG2Q9UGJ0 569 aa19.15■□□□□ 0.66
PTPDC1-202ENST00000375360 FOXP2O15409 715 aa19.14■□□□□ 0.66
PTPDC1-202ENST00000375360 BNIP3LO60238 219 aa19.14■□□□□ 0.66
PTPDC1-202ENST00000375360 C2CD6Q53TS8 623 aa19.14■□□□□ 0.66
PTPDC1-202ENST00000375360 MOB2Q70IA6 237 aa19.14■□□□□ 0.66
PTPDC1-202ENST00000375360 RBBP8NLQ8NC74 664 aaPredicted RBP19.14■□□□□ 0.66
PTPDC1-202ENST00000375360 MICAL1Q8TDZ2 1067 aa19.14■□□□□ 0.66
PTPDC1-202ENST00000375360 ELF1P32519 619 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 NOP14P78316 857 aaKnown RBP19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 GPC2Q8N158 579 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 A0A087X0T9 212 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 SLITRK3O94933 977 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 FAM228BP0C875 321 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 RFX1P22670 979 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 PGM5Q15124 567 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 PDIK1LQ8N165 341 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 MKNK1Q9BUB5 465 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 SNX12Q9UMY4 172 aa19.14■□□□□ 0.65
PTPDC1-202ENST00000375360 CREB3O43889 395 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 CPP00450 1065 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 RFC5P40937 340 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 LY6KQ17RY6 165 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 Q4G0T1 1027 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 MMS22LQ6ZRQ5 1243 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 DNAAF5Q86Y56 855 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 STRIP2Q9ULQ0 834 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 NOC2LQ9Y3T9 749 aaKnown RBP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 PTPRAP18433 802 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ANXA13P27216 316 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 CC2D1AQ6P1N0 951 aaPredicted RBP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 OTOP1Q7RTM1 612 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 RNPC3Q96LT9 517 aaKnown RBP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ZBED2Q9BTP6 218 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 AGO4Q9HCK5 861 aaKnown RBP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 BLOC1S4Q9NUP1 217 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 CPSF3Q9UKF6 684 aaKnown RBP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 PLAGL2Q9UPG8 496 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ARHGEF37A1IGU5 675 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 FOXN3O00409 490 aaPredicted RBP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 RASGRF2O14827 1237 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 GRAP2O75791 330 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 CCT5P48643 541 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ERVK-24P63145 666 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 LAMC2Q13753 1193 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 GLRA4Q5JXX5 417 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ZNF720Q7Z2F6 126 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 TRIM59Q8IWR1 403 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 FAM49BQ9NUQ9 324 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 NRXN3Q9Y4C0 1643 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 SUPT20HL2P0C7V6 817 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 VPS52Q8N1B4 723 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 WHAMMQ8TF30 809 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 LRRC1Q9BTT6 524 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 EFCC1Q9HA90 598 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ASNSD1Q9NWL6 643 aa19.13■□□□□ 0.65
PTPDC1-202ENST00000375360 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
PTPDC1-202ENST00000375360 EXOC1LA0A1B0GW35 172 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms