RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 DDX56Q9NY93 547 aaKnown RBP16.9■□□□□ 0.3
COL17A1-202ENST00000369733 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 M0QZ92 97 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 DNAJC6O75061 913 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 SCP2P22307 547 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 RABGAP1LQ5R372 815 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 BZW1Q7L1Q6 419 aaKnown RBP16.9■□□□□ 0.3
COL17A1-202ENST00000369733 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 ASNSD1Q9NWL6 643 aa16.9■□□□□ 0.3
COL17A1-202ENST00000369733 DMGDHQ9UI17 866 aaKnown RBP16.9■□□□□ 0.3
COL17A1-202ENST00000369733 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
COL17A1-202ENST00000369733 ITIH4Q14624 930 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 RARS2Q5T160 578 aaKnown RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 FOXR1Q6PIV2 292 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 PLA2G12BQ9BX93 195 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 KRT82Q9NSB4 513 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 PCSK1NQ9UHG2 260 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 CUL3Q13618 768 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 ZNF512BQ96KM6 892 aaPredicted RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 APOL6Q9BWW8 343 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 LACRTQ9GZZ8 138 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 ARAP3Q8WWN8 1544 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 TMEM253P0C7T8 217 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 PYGBP11216 843 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 JAK3P52333 1124 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 RANBP17Q9H2T7 1088 aaKnown RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 SNX25Q9H3E2 840 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 DENND3A2RUS2 1198 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 UBE2Q2LH0YL09 131 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 EYA4O95677 639 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 NQO1P15559 274 aaKnown RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 MED21Q13503 144 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 NCAPG2Q86XI2 1143 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
COL17A1-202ENST00000369733 UBE4BO95155 1302 aa16.89■□□□□ 0.29
COL17A1-202ENST00000369733 HNRNPCP07910 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 KRT7P08729 469 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 FMO5P49326 533 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 KCNQ4P56696 695 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 KYNUQ16719 465 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 KIF19Q2TAC6 998 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 TMEM259Q4ZIN3 620 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 ATP6V1E2Q96A05 226 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 NOD1Q9Y239 953 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 ROR1Q01973 937 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 EDRF1Q3B7T1 1238 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 ENOSF1Q7L5Y1 443 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 MRPL40Q9NQ50 206 aaKnown RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 SLC9A2Q9UBY0 812 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 KCND1Q9NSA2 647 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 ANP32DO95626 131 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 TOB1P50616 345 aaPredicted RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 KLC3Q6P597 504 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 TRIM72Q6ZMU5 477 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 PSMC3IPQ9P2W1 217 aaPredicted RBP16.88■□□□□ 0.29
COL17A1-202ENST00000369733 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
COL17A1-202ENST00000369733 COPB2P35606 906 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 OCA2Q04671 838 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 TEDDM1Q5T9Z0 273 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 LXNQ9BS40 222 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 DLC1Q96QB1 1528 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 SERPINB2P05120 415 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
COL17A1-202ENST00000369733 MTMR1Q13613 665 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 LRRC36Q1X8D7 754 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 DNAL1Q4LDG9 190 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 PDXDC2PQ6P474 469 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 TPCN2Q8NHX9 752 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 DACT3Q96B18 629 aaPredicted RBP16.87■□□□□ 0.29
COL17A1-202ENST00000369733 RPF1Q9H9Y2 349 aaKnown RBP16.87■□□□□ 0.29
COL17A1-202ENST00000369733 PARVAQ9NVD7 372 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
COL17A1-202ENST00000369733 CEP152O94986 1710 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 DCAF15Q66K64 600 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 SLC30A5Q8TAD4 765 aa16.87■□□□□ 0.29
COL17A1-202ENST00000369733 FAM84BQ96KN1 310 aaPredicted RBP16.87■□□□□ 0.29
COL17A1-202ENST00000369733 REEP2Q9BRK0 252 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms