RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ARL4AP40617 200 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 GIT2Q14161 759 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 TAF12Q16514 161 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 MAP3K21Q5TCX8 1036 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 TTC13Q8NBP0 860 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 NSMCE1Q8WV22 266 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 CPA5Q8WXQ8 436 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 PCSK1NQ9UHG2 260 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 INTUQ9ULD6 942 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 HSPA9P38646 679 aaKnown RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 IFRD2Q12894 506 aaPredicted RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 ZBED8Q8IZ13 594 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 ATL2Q8NHH9 583 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 VCPKMTQ9H867 229 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 KLC4Q9NSK0 619 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 KLHL11Q9NVR0 708 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 ESRRAP11474 423 aaPredicted RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 PDIA2Q13087 525 aaKnown RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 PTGISQ16647 500 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 ZNF568Q3ZCX4 644 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.44□□□□□ -0.42
COPA-202ENST00000368069 XPO6Q96QU8 1125 aaKnown RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 SNX25Q9H3E2 840 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 BCAP29Q9UHQ4 241 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 SPAG7O75391 227 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 SERPINB6P35237 376 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 IRX4P78413 519 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 LONRF1Q17RB8 773 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 PPP6R3Q5H9R7 873 aaPredicted RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 MXRA8Q9BRK3 442 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 TIPINQ9BVW5 301 aa12.44□□□□□ -0.42
COPA-202ENST00000368069 DBR1Q9UK59 544 aaKnown RBP12.44□□□□□ -0.42
COPA-202ENST00000368069 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 PI4K2BG5E9Z4 385 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 KCNJ1P48048 391 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 CORO7P57737 925 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 ZNF571Q7Z3V5 609 aaPredicted RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 CYFIP2Q96F07 1278 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 GIPC1O14908 333 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 SLC1A1P43005 524 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 PCGF5Q86SE9 256 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 FBXO41Q8TF61 875 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 TUBB6Q9BUF5 446 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 TRIM55Q9BYV6 548 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 ECT2Q9H8V3 914 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 GGT7Q9UJ14 662 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 MAGED2Q9UNF1 606 aaPredicted RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 OPHN1O60890 802 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 NOL3O60936 208 aaKnown RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 GMNNO75496 209 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 ECE1P42892 770 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 GPC3P51654 580 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 MEA1Q16626 185 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 MOXD1Q6UVY6 613 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 FAM167AQ96KS9 214 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 RIT2Q99578 217 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 CARD9Q9H257 536 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 ATRNO75882 1429 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 COPEO14579 308 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 XPOTO43592 962 aaKnown RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 AKAP3O75969 853 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 KRT37O76014 449 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 ACOT2P49753 483 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 ARSEP51690 589 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 KDM7AQ6ZMT4 941 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 DNAAF3Q8N9W5 541 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 DEPDC1BQ8WUY9 529 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 SEC16BQ96JE7 1060 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
COPA-202ENST00000368069 SMYD2Q9NRG4 433 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 PARVAQ9NVD7 372 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
COPA-202ENST00000368069 GLI1P08151 1106 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 DRP2Q13474 957 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 TFDP2Q14188 446 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 KLHL38Q2WGJ6 581 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 TRMT10CQ7L0Y3 403 aaKnown RBP12.42□□□□□ -0.42
COPA-202ENST00000368069 HAUS2Q9NVX0 235 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
COPA-202ENST00000368069 LCMT1Q9UIC8 334 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 TCHHQ07283 1943 aa12.42□□□□□ -0.42
COPA-202ENST00000368069 H0Y3Z8 333 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms