RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 MIGA2Q7L4E1 593 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 FAM83AQ86UY5 434 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 CBARPQ8N350 705 aaPredicted RBP4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 DNERQ8NFT8 737 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 RAB24Q969Q5 203 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 MIEF2Q96C03 454 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 TEKT5Q96M29 485 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 C7orf25Q9BPX7 421 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 GPR87Q9BY21 358 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 ASPSCR1Q9BZE9 553 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 CD248Q9HCU0 757 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 LANCL2Q9NS86 450 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 DDX56Q9NY93 547 aaKnown RBP4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 POGKQ9P215 609 aa4.56□□□□□ -1.68
RNU4-1-201ENST00000363925 TRIM75PA6NK02 468 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 FAM171A2A8MVW0 826 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 PPM1GO15355 546 aaPredicted RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 ENDOD1O94919 500 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 IL33O95760 270 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 C5AR1P21730 350 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 MCAMP43121 646 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 EFEMP1Q12805 493 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 MRPL49Q13405 166 aaKnown RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 PUM1Q14671 1186 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 USP39Q53GS9 565 aaKnown RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 RRP12Q5JTH9 1297 aaKnown RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 RSPH3Q86UC2 560 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 RPUSD2Q8IZ73 545 aaKnown RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 MIER2Q8N344 545 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 OR7D4Q8NG98 312 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 ZNF341Q9BYN7 854 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 TMEM140Q9NV12 185 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 IP6K2Q9UHH9 426 aa4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 RUVBL1Q9Y265 456 aaKnown RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 LUC7L2Q9Y383 392 aaKnown RBP4.55□□□□□ -1.68
RNU4-1-201ENST00000363925 GOLGA6L6A8MZA4 724 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHGA12O60330 932 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 GASTP01350 101 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PDGFRBP09619 1106 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 CRHR1P34998 444 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 MAN2A2P49641 1150 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 EXOSC10Q01780 885 aaKnown RBP4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PTH1RQ03431 593 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 MST1LQ2TV78 715 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 INAVAQ3KP66 663 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 MAMDC4Q6UXC1 1216 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 Q6ZRM9 215 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 Q6ZSN1 163 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 SPRED1Q7Z699 444 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 ANKRD13AQ8IZ07 590 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 RNF169Q8NCN4 708 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 TFAP2CQ92754 450 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 MANSC1Q9H8J5 431 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 EIF2B4Q9UI10 523 aaKnown RBP4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 AJAP1Q9UKB5 411 aaPredicted RBP4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHGA9Q9Y5G4 932 aaKnown RBP4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHGA8Q9Y5G5 932 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHGA7Q9Y5G6 932 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHGA6Q9Y5G7 932 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHGA3Q9Y5H0 932 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 PCDHA13Q9Y5I0 950 aa4.54□□□□□ -1.68
RNU4-1-201ENST00000363925 ALDH1L1O75891 902 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 RECQLP46063 649 aaPredicted RBP4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 SCNN1GP51170 649 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 NEK2P51955 445 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 PPP3CAQ08209 521 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 ODF1Q14990 250 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 GJC2Q5T442 439 aaPredicted RBP4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 APBB1IPQ7Z5R6 666 aaPredicted RBP4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 TRMT2AQ8IZ69 625 aaKnown RBP4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 SSH1Q8WYL5 1049 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 EDAQ92838 391 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 EXTL1Q92935 676 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 HDAC10Q969S8 669 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 HOOK2Q96ED9 719 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 CEP95Q96GE4 821 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 TMX3Q96JJ7 454 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 PLEKHG4BQ96PX9 1271 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 PDCD2LQ9BRP1 358 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 BCO1Q9HAY6 547 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 ZNF277Q9NRM2 450 aaPredicted RBP4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 TDP1Q9NUW8 608 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 MOCS1Q9NZB8 636 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 TRPS1Q9UHF7 1281 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 TUBD1Q9UJT1 453 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 JAG2Q9Y219 1238 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 TSC22D4Q9Y3Q8 395 aa4.53□□□□□ -1.68
RNU4-1-201ENST00000363925 CCDC154A6NI56 674 aa4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 FAM20BO75063 409 aa4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 RPS6KA4O75676 772 aa4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 S100BP04271 92 aaPredicted RBP4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 IL2RBP14784 551 aa4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 ATP5JP18859 108 aa4.52□□□□□ -1.69
RNU4-1-201ENST00000363925 ACRV1P26436 265 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms