RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 LVRNQ6Q4G3 990 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 ZNF473Q8WTR7 871 aaKnown RBP16.96■□□□□ 0.3
COL18A1-203ENST00000359759 PGBD4Q96DM1 585 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 SATB2Q9UPW6 733 aa16.96■□□□□ 0.3
COL18A1-203ENST00000359759 NMT2O60551 498 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 INPP5AQ14642 412 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
COL18A1-203ENST00000359759 SENP1Q9P0U3 644 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 TBC1D4O60343 1298 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 S100A5P33763 92 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 FAM102AQ5T9C2 384 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-203ENST00000359759 COG1Q8WTW3 980 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 RMDN1Q96DB5 314 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 SPON2Q9BUD6 331 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 YIPF2Q9BWQ6 316 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 ASAP2O43150 1006 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 CACNB3P54284 484 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
COL18A1-203ENST00000359759 SARM1Q6SZW1 724 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 FAM217BQ9NTX9 383 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-203ENST00000359759 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.95■□□□□ 0.3
COL18A1-203ENST00000359759 DENND3A2RUS2 1198 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 DGKIO75912 1065 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 ELMOD1Q8N336 334 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 ZBED2Q9BTP6 218 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 KCNN4O15554 427 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 TWF2Q6IBS0 349 aaKnown RBP16.95■□□□□ 0.3
COL18A1-203ENST00000359759 XXYLT1Q8NBI6 393 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
COL18A1-203ENST00000359759 STXBP3O00186 592 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 CYB5R4Q7L1T6 521 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 AGAP3Q96P47 875 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 LRRC1Q9BTT6 524 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 WNT8AQ9H1J5 351 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 TRABDQ9H4I3 376 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 PCDHGB4Q9UN71 923 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 APOL1O14791 398 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 SESN2P58004 480 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-203ENST00000359759 CC2D2BQ6DHV5 1058 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 IL1RL2Q9HB29 575 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 PP2D1A8MPX8 630 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 PHF20L1A8MW92 1017 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 BCAR1P56945 870 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 MAPRE2Q15555 327 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L15C9J2P7 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L13C9JLJ4 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L11C9JVI0 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L18D6R9N7 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L22D6RA61 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L17D6RBQ6 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L19D6RCP7 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L20D6RJB6 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 CDH6P55285 790 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 SIK1P57059 783 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L24Q0WX57 530 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
COL18A1-203ENST00000359759 SNRNP27Q8WVK2 155 aaKnown RBP16.94■□□□□ 0.3
COL18A1-203ENST00000359759 NPHP3-ACAD11A0A0J9YXS1 232 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 MTF1Q14872 753 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 EFHC2Q5JST6 749 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 CDKL3Q8IVW4 592 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 ELMO2Q96JJ3 720 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 FBXO2Q9UK22 296 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 COPG1Q9Y678 874 aaKnown RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 EIF3EP60228 445 aaKnown RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 MAPK6Q16659 721 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 PKN3Q6P5Z2 889 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 USE1Q9NZ43 259 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 HMOX2P30519 316 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 JAK3P52333 1124 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 MED21Q13503 144 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 KIF2BQ8N4N8 673 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 FLCNQ8NFG4 579 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 WWP1Q9H0M0 922 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 C20orf96Q9NUD7 363 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 SLC9A1P19634 815 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 PLOD1Q02809 727 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 GRIN1Q05586 938 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 PID1Q7Z2X4 250 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 IFNEQ86WN2 208 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 CATSPER1Q8NEC5 780 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 STAMBPL1Q96FJ0 436 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 OTUB1Q96FW1 271 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 TRIM51Q9BSJ1 452 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 DDX56Q9NY93 547 aaKnown RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 ZBTB1Q9Y2K1 713 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms