RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 ACTN1P12814 892 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 TARSP26639 723 aaKnown RBP15.71■□□□□ 0.11
TOP3B-201ENST00000357179 POLGP54098 1239 aaPredicted RBP15.71■□□□□ 0.11
TOP3B-201ENST00000357179 YARSP54577 528 aaKnown RBP15.71■□□□□ 0.11
TOP3B-201ENST00000357179 JAM2P57087 298 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 SETDB1Q15047 1291 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 KNOP1Q1ED39 458 aaKnown RBP15.71■□□□□ 0.11
TOP3B-201ENST00000357179 ARSHQ5FYA8 562 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 GPATCH4Q5T3I0 446 aaKnown RBP15.71■□□□□ 0.11
TOP3B-201ENST00000357179 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 MOXD1Q6UVY6 613 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.11
TOP3B-201ENST00000357179 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
TOP3B-201ENST00000357179 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 GTPBP10A4D1E9 387 aaKnown RBP15.7■□□□□ 0.1
TOP3B-201ENST00000357179 ZBTB5O15062 677 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 SLC16A3O15427 465 aaKnown RBP15.7■□□□□ 0.1
TOP3B-201ENST00000357179 ENTPD5O75356 428 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 KRT18P05783 430 aaKnown RBP15.7■□□□□ 0.1
TOP3B-201ENST00000357179 XRCC5P13010 732 aaKnown RBP15.7■□□□□ 0.1
TOP3B-201ENST00000357179 ATP5DP30049 168 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 OCRLQ01968 901 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 RCN2Q14257 317 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 EPHA7Q15375 998 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 CLUL1Q15846 466 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 LONRF1Q17RB8 773 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 SLFN12Q8IYM2 578 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 LRRC47Q8N1G4 583 aaKnown RBP15.7■□□□□ 0.1
TOP3B-201ENST00000357179 PTPRN2Q92932 1015 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 PSTPIP2Q9H939 334 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 PODXLO00592 558 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 TTLL1O95922 423 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 SKIP12755 728 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 CACNA2D1P54289 1103 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 BMT2Q1RMZ1 405 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 CCDC24Q8N4L8 307 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
TOP3B-201ENST00000357179 OPTNQ96CV9 577 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 KCNK9Q9NPC2 374 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 CHKBQ9Y259 395 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 STK24Q9Y6E0 443 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 ARFGEF1Q9Y6D6 1849 aa15.7■□□□□ 0.1
TOP3B-201ENST00000357179 TRAFD1O14545 582 aaPredicted RBP15.69■□□□□ 0.1
TOP3B-201ENST00000357179 PHF2O75151 1096 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 EPHB2P29323 1055 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 STX2P32856 288 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 PPATQ06203 517 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 NFIXQ14938 502 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 LRRC8CQ8TDW0 803 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 C18orf8Q96DM3 657 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 PLEKHG4BQ96PX9 1271 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 NDNQ99608 321 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.13e-9■■■□□ 17
TOP3B-201ENST00000357179 TJP3O95049 919 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 FAM163BP0C2L3 166 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 T-ENOLP0DO92 83 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 TAC1P20366 129 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 KCNA3P22001 575 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 GSTT1P30711 240 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 CHRNA3P32297 505 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 NCSTNQ92542 709 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 GATA6Q92908 595 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 SIX2Q9NPC8 291 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 OSGEPQ9NPF4 335 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 PCYOX1Q9UHG3 505 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 MAGEA13PA6NCF6 341 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 ATP9AO75110 1047 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 MED24O75448 989 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 SETSIPP0DME0 302 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
TOP3B-201ENST00000357179 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
TOP3B-201ENST00000357179 GIT2Q14161 759 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 TRMT10CQ7L0Y3 403 aaKnown RBP15.69■□□□□ 0.1
TOP3B-201ENST00000357179 GJA10Q969M2 543 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 LRRC37BQ96QE4 947 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 PITPNM3Q9BZ71 974 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 OCEL1Q9H607 264 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 TLE6Q9H808 572 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 TYW1Q9NV66 732 aaKnown RBP15.69■□□□□ 0.1
TOP3B-201ENST00000357179 PDP2Q9P2J9 529 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 ATXN10Q9UBB4 475 aa15.69■□□□□ 0.1
TOP3B-201ENST00000357179 NCANO14594 1321 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 PENKP01210 267 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-201ENST00000357179 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 KRT13P13646 458 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 BRAFP15056 766 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 AKR1B1P15121 316 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 RASSF2P50749 326 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 GALCP54803 685 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 MYBPC3Q14896 1274 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 POTEEQ6S8J3 1075 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 SYT2Q8N9I0 419 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-201ENST00000357179 ART4Q93070 314 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
TOP3B-201ENST00000357179 USH1CQ9Y6N9 552 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms