RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 MFSD10Q14728 455 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 RPS6KA2Q15349 733 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 PTGISQ16647 500 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 RAPH1Q70E73 1250 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 ASIC4Q96FT7 647 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 OSMRQ99650 979 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 PCSK1NQ9UHG2 260 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 EVI5O60447 810 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 CPP00450 1065 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SETDB1Q15047 1291 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 CRY2Q49AN0 593 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 FYB2Q5VWT5 728 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 C15orf52Q6ZUT6 534 aaKnown RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 ENOSF1Q7L5Y1 443 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 HPS3Q969F9 1004 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 DEFB118Q96PH6 123 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SENP7Q9BQF6 1050 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SP110Q9HB58 689 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SPTLC3Q9NUV7 552 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 TBKBP1A7MCY6 615 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 BUB1BO60566 1050 aaPredicted RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 AMHP03971 560 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 CLTAP09496 248 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 GHRP10912 638 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 PRKAR2AP13861 404 aaKnown RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SLC30A10Q6XR72 485 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 MCUQ8NE86 351 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 ATP6V1E2Q96A05 226 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 IFT43Q96FT9 208 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 TRIM56Q9BRZ2 755 aaKnown RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 KIFC3Q9BVG8 833 aa10.37□□□□□ -0.75
GABPA-201ENST00000354828 SUDS3Q9H7L9 328 aaPredicted RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 KLHL8Q9P2G9 620 aaPredicted RBP10.37□□□□□ -0.75
GABPA-201ENST00000354828 ZNF142P52746 1687 aaPredicted RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 PIK3R2O00459 728 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 CLGNO14967 610 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 INSRRP14616 1297 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 DRAP1Q14919 205 aaPredicted RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 GRIK5Q16478 980 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 PRAMEF19Q5SWL8 479 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 C10orf76Q5T2E6 689 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 IQSEC1Q6DN90 963 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 HDXQ7Z353 690 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 DNAJB3Q8WWF6 145 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 RPGRIP1Q96KN7 1286 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 ABI2Q9NYB9 513 aaPredicted RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 SLC15A5A6NIM6 579 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 CYP11B2P19099 503 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 TAF6P49848 677 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 GUCY2FP51841 1108 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 MTMR3Q13615 1198 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 GRIK4Q16099 956 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 SGSM1Q2NKQ1 1148 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 ERCC6LQ2NKX8 1250 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 ZC2HC1CQ53FD0 456 aaPredicted RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 MON2Q7Z3U7 1717 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 SLITRK1Q96PX8 696 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 TRIM9Q9C026 710 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 MSRAQ9UJ68 235 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 UBQLN1Q9UMX0 589 aaKnown RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 PGK1P00558 417 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 PGM5Q15124 567 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 CATSPER3Q86XQ3 398 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 TSC1Q92574 1164 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 TMEM60Q9H2L4 133 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 HEY1Q9Y5J3 304 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 SLIT2O94813 1529 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 H7C4K7 107 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 FTCDO95954 541 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 SOX5P35711 763 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 SREBF1P36956 1147 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 FLT3LGP49771 235 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 ATP11AP98196 1134 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 MAP2K5Q13163 448 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 KCNB1Q14721 858 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 KRT71Q3SY84 523 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 NFRKBQ6P4R8 1299 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 CXCL17Q6UXB2 119 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 DCLK2Q8N568 766 aa10.36□□□□□ -0.75
GABPA-201ENST00000354828 MMTAG2Q9BU76 263 aaKnown RBP10.36□□□□□ -0.75
GABPA-201ENST00000354828 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 ONECUT3O60422 494 aaPredicted RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 SRGAP2O75044 1071 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 CABYRO75952 493 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 U2AF2P26368 475 aaKnown RBP eCLIP10.35□□□□□ -0.75
GABPA-201ENST00000354828 RGS7P49802 495 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 PSEN2P49810 448 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 GPR142Q7Z601 462 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 RHOT2Q8IXI1 618 aa10.35□□□□□ -0.75
GABPA-201ENST00000354828 UHMK1Q8TAS1 419 aaKnown RBP10.35□□□□□ -0.75
GABPA-201ENST00000354828 A1CFQ9NQ94 594 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 1489.1 ms