RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KLK7P49862 253 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 DLG4P78352 724 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 KCNMA1Q12791 1236 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 KCNH2Q12809 1159 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 CRELD2Q6UXH1 353 aaPredicted RBP16■□□□□ 0.15
CXCL12-201ENST00000343575 TMEM40Q8WWA1 233 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
CXCL12-201ENST00000343575 MRPL4Q9BYD3 311 aaKnown RBP16■□□□□ 0.15
CXCL12-201ENST00000343575 FRMD4BQ9Y2L6 1034 aa16■□□□□ 0.15
CXCL12-201ENST00000343575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16■□□□□ 0.15
CXCL12-201ENST00000343575 A0A1W2PQC6 194 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 RNF225M0QZC1 329 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-201ENST00000343575 MAPK13O15264 365 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 ATP8B1O43520 1251 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 GNAT1P11488 350 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 H2AFXP16104 143 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-201ENST00000343575 ITGA7Q13683 1181 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 SLC9C1Q4G0N8 1177 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 ZBTB41Q5SVQ8 909 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 NLRP7Q8WX94 980 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-201ENST00000343575 SIK3Q9Y2K2 1263 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 ITIH6Q6UXX5 1313 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 MOXD2PA6NHM9 499 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 PES1O00541 588 aaKnown RBP15.99■□□□□ 0.15
CXCL12-201ENST00000343575 TOM1L1O75674 476 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 WNT7BP56706 349 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 GOLGA8FQ08AF8 430 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 GOLGA8DPQ0D2H9 430 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 SNRNP35Q16560 246 aaKnown RBP15.99■□□□□ 0.15
CXCL12-201ENST00000343575 EEF1DP3Q658K8 133 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 DPY19L2P1Q6NXN4 242 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 TSHZ1Q6ZSZ6 1077 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 SERINC5Q86VE9 423 aa15.99■□□□□ 0.15
CXCL12-201ENST00000343575 CDR2LQ86X02 465 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-201ENST00000343575 CABYRO75952 493 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 FGFR4P22455 802 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 SLC20A2Q08357 652 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 BFSP1Q12934 665 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 PRPF4BQ13523 1007 aaKnown RBP15.98■□□□□ 0.15
CXCL12-201ENST00000343575 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 SRGAP1Q7Z6B7 1085 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 GPD1LQ8N335 351 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 MFSD14AQ96MC6 490 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 OSMRQ99650 979 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 PRMT7Q9NVM4 692 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-201ENST00000343575 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
CXCL12-201ENST00000343575 AGO2Q9UKV8 859 aaKnown RBP15.98■□□□□ 0.15
CXCL12-201ENST00000343575 A0A1W2PQ45 241 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 A0A1W2PQY0 241 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TSPAN1O60635 241 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 GYPCP04921 128 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TRIM49P0CI25 452 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TRIM49CP0CI26 452 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 CCL5P13501 91 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 DARSP14868 501 aaKnown RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 ARF4P18085 180 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 HOXA11P31270 313 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 ACOT2P49753 483 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 LBX1P52954 281 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 MCL1Q07820 350 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 ELF2Q15723 593 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 SEZ6Q53EL9 994 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 DCAF17Q5H9S7 520 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 ATF7IP2Q5U623 682 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 SLFN12LQ6IEE8 588 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TAF2Q6P1X5 1199 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 DEFB118Q96PH6 123 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 FAM213AQ9BRX8 229 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TTYH3Q9C0H2 523 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 GINS2Q9Y248 185 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TNFSF13BQ9Y275 285 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 CNTNAP2Q9UHC6 1331 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 EPHB6O15197 1021 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 CLDN3O15551 220 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 EXTL3O43909 919 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 CDC42EP1Q00587 391 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 PPP3CAQ08209 521 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 RBL2Q08999 1139 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 NAA30Q147X3 362 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 SNX17Q15036 470 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TEX35Q5T0J7 233 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 INTS8Q75QN2 995 aaKnown RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 CTU1Q7Z7A3 348 aaKnown RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 NME8Q8N427 588 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 ARRDC4Q8NCT1 418 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 PARD3BQ8TEW8 1205 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 CPB2Q96IY4 423 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 RNF208Q9H0X6 261 aa15.97■□□□□ 0.15
CXCL12-201ENST00000343575 TRMT13Q9NUP7 481 aaKnown RBP15.97■□□□□ 0.15
CXCL12-201ENST00000343575 USP27XA6NNY8 438 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 AFPP02771 609 aaKnown RBP15.96■□□□□ 0.15
CXCL12-201ENST00000343575 EIF4BP23588 611 aaKnown RBP15.96■□□□□ 0.15
CXCL12-201ENST00000343575 FXR1P51114 621 aaKnown RBP eCLIP15.96■□□□□ 0.15
CXCL12-201ENST00000343575 VAMP7P51809 220 aa15.96■□□□□ 0.15
CXCL12-201ENST00000343575 APBA1Q02410 837 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms