RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 FIGNQ5HY92 759 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 RNF180Q86T96 592 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
CLDN4-201ENST00000340958 OR8K1Q8NGG5 319 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 CRISPLD2Q9H0B8 497 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 GCNT4Q9P109 453 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 STYXL1Q9Y6J8 313 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 TREHO43280 583 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 CSDE1O75534 798 aaKnown RBP18.85■□□□□ 0.61
CLDN4-201ENST00000340958 ERLIN2O94905 339 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 ACOT2P49753 483 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 GPC3P51654 580 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 DLG4P78352 724 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 ZBED6P86452 979 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 KIZQ2M2Z5 673 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 ATF7IP2Q5U623 682 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 FNBP1Q96RU3 617 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 ACO2Q99798 780 aaKnown RBP18.85■□□□□ 0.61
CLDN4-201ENST00000340958 NAA15Q9BXJ9 866 aaKnown RBP18.85■□□□□ 0.61
CLDN4-201ENST00000340958 FZD8Q9H461 694 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 IFT122Q9HBG6 1241 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 AGPAT5Q9NUQ2 364 aa18.85■□□□□ 0.61
CLDN4-201ENST00000340958 EVPLQ92817 2033 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 A0A1W2PQJ5 194 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 MBLAC1A4D2B0 266 aaPredicted RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 ADAMTS4O75173 837 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 ASGR1P07306 291 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 ADRB2P07550 413 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 DLATP10515 647 aaKnown RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 GCLMP48507 274 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 ZNF200P98182 395 aaPredicted RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 CYP24A1Q07973 514 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 NBPF20Q3BBV1 942 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 LHX8Q68G74 356 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 RUFY4Q6ZNE9 571 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 DNAJB3Q8WWF6 145 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 GCOM2Q9BZD3 368 aaPredicted RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 MINDY3Q9H8M7 445 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 A0A0B4J269 797 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 GTPBP10A4D1E9 387 aaKnown RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 B4GALT5O43286 388 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 TFRCP02786 760 aaKnown RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 EDN1P05305 212 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 SLC9A1P19634 815 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 NCBP1Q09161 790 aaKnown RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 ZNF568Q3ZCX4 644 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 TSHZ1Q6ZSZ6 1077 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 FBXL18Q96ME1 805 aa18.84■□□□□ 0.61
CLDN4-201ENST00000340958 RBAKQ9NYW8 714 aaPredicted RBP18.84■□□□□ 0.61
CLDN4-201ENST00000340958 TTLL13PA6NNM8 815 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 RNF225M0QZC1 329 aaPredicted RBP18.83■□□□□ 0.6
CLDN4-201ENST00000340958 ARHGAP6O43182 974 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 POLR2FP61218 127 aaKnown RBP18.83■□□□□ 0.6
CLDN4-201ENST00000340958 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLDN4-201ENST00000340958 CBWD6Q4V339 395 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 CBWD3Q5JTY5 395 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 CBWD5Q5RIA9 395 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 MPZL3Q6UWV2 235 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 RRAGAQ7L523 313 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 SRGAP1Q7Z6B7 1085 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 C17orf53Q8N3J3 647 aaPredicted RBP18.83■□□□□ 0.6
CLDN4-201ENST00000340958 MFSD14AQ96MC6 490 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 TTYH3Q9C0H2 523 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 TMX1Q9H3N1 280 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 NLRC4Q9NPP4 1024 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 CEP72Q9P209 647 aa18.83■□□□□ 0.6
CLDN4-201ENST00000340958 EPHB6O15197 1021 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 ACTN1P12814 892 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 PON1P27169 355 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 MXI1P50539 228 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 NKX3-2P78367 333 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 CYP26C1Q6V0L0 522 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 IFNLR1Q8IU57 520 aaPredicted RBP18.82■□□□□ 0.6
CLDN4-201ENST00000340958 TMC2Q8TDI7 906 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 PRIMPOLQ96LW4 560 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 OGDHLQ9ULD0 1010 aa18.82■□□□□ 0.6
CLDN4-201ENST00000340958 DNAH12Q6ZR08 3092 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 IQCF3P0C7M6 154 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 TNNI1P19237 187 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 CST5P28325 142 aaPredicted RBP18.81■□□□□ 0.6
CLDN4-201ENST00000340958 PPP3CAQ08209 521 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 HIC1Q14526 733 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 SEZ6Q53EL9 994 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 TMTC1Q8IUR5 882 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 KLHDC9Q8NEP7 349 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 PARD3BQ8TEW8 1205 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 POP1Q99575 1024 aaKnown RBP18.81■□□□□ 0.6
CLDN4-201ENST00000340958 OSMRQ99650 979 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 EDEM3Q9BZQ6 932 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 HAPLN2Q9GZV7 340 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 TNFSF13BQ9Y275 285 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 LRRIQ3A6PVS8 624 aaPredicted RBP18.81■□□□□ 0.6
CLDN4-201ENST00000340958 M0QZ92 97 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 P4HA2O15460 535 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 MCL1Q07820 350 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 FAM187BQ17R55 369 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 TAF2Q6P1X5 1199 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 RSPH3Q86UC2 560 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms