RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 NAB2Q15742 525 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 RILPL1Q5EBL4 403 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 HYIQ5T013 277 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 C1orf186Q6ZWK4 172 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 BACH2Q9BYV9 841 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 UBN1Q9NPG3 1134 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
BRCC3-202ENST00000340647 FAN1Q9Y2M0 1017 aa18.85■□□□□ 0.61
BRCC3-202ENST00000340647 PDCD11Q14690 1871 aaKnown RBP18.84■□□□□ 0.61
BRCC3-202ENST00000340647 ACKR2O00590 384 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 PTGESO14684 152 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 IGFBP6P24592 240 aaPredicted RBP18.84■□□□□ 0.61
BRCC3-202ENST00000340647 GRIN1Q05586 938 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 RINT1Q6NUQ1 792 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 DTHD1Q6ZMT9 781 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 PAAF1Q9BRP4 392 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 UPF2Q9HAU5 1272 aaKnown RBP18.84■□□□□ 0.61
BRCC3-202ENST00000340647 SMC3Q9UQE7 1217 aa18.84■□□□□ 0.61
BRCC3-202ENST00000340647 PRG3Q9Y2Y8 225 aaPredicted RBP18.84■□□□□ 0.61
BRCC3-202ENST00000340647 CITO14578 2027 aa18.83■□□□□ 0.61
BRCC3-202ENST00000340647 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.83■□□□□ 0.6
BRCC3-202ENST00000340647 PRKCBP05771 671 aa18.83■□□□□ 0.6
BRCC3-202ENST00000340647 ALYREFQ86V81 257 aaKnown RBP18.83■□□□□ 0.6
BRCC3-202ENST00000340647 C12orf76Q8N812 135 aaPredicted RBP18.83■□□□□ 0.6
BRCC3-202ENST00000340647 RABGGTAQ92696 567 aa18.83■□□□□ 0.6
BRCC3-202ENST00000340647 KLHL5Q96PQ7 755 aa18.83■□□□□ 0.6
BRCC3-202ENST00000340647 SNTG2Q9NY99 539 aa18.83■□□□□ 0.6
BRCC3-202ENST00000340647 MUTYHQ9UIF7 546 aa18.83■□□□□ 0.6
BRCC3-202ENST00000340647 KIF3AQ9Y496 699 aa18.83■□□□□ 0.6
BRCC3-202ENST00000340647 ZMYM2Q9UBW7 1377 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 FSD2A1L4K1 749 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 HIP1RO75146 1068 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 CNPP09543 421 aaKnown RBP18.82■□□□□ 0.6
BRCC3-202ENST00000340647 NPTX2P47972 431 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
BRCC3-202ENST00000340647 MAPK6Q16659 721 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 KIAA0319Q5VV43 1072 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 LARP1BQ659C4 914 aaKnown RBP18.82■□□□□ 0.6
BRCC3-202ENST00000340647 ZBTB8OSQ8IWT0 167 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 PHF7Q9BWX1 381 aaPredicted RBP18.82■□□□□ 0.6
BRCC3-202ENST00000340647 GPR62Q9BZJ7 368 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 C2orf40Q9H1Z8 148 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 ZNF318Q5VUA4 2279 aa18.82■□□□□ 0.6
BRCC3-202ENST00000340647 VWA3AA6NCI4 1184 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 H3BQV1 296 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 ABLIM1O14639 778 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 MEFVO15553 781 aaPredicted RBP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 DCXO43602 365 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 SOD2P04179 222 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 SSBP05455 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 WEE2P0C1S8 567 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 ALADP13716 330 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 OR1G1P47890 313 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 SLC12A3P55017 1021 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 NCBP1Q09161 790 aaKnown RBP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 TMEM119Q4V9L6 283 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 HERC4Q5GLZ8 1057 aaPredicted RBP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 KRT79Q5XKE5 535 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 KIFAP3Q92845 792 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 CASP10Q92851 521 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 B3GALT6Q96L58 329 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 FAM193BQ96PV7 902 aaPredicted RBP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 PLIN2Q99541 437 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 HERC2P3Q9BVR0 1158 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 TRIM6Q9C030 488 aaPredicted RBP18.81■□□□□ 0.6
BRCC3-202ENST00000340647 PTPRHQ9HD43 1115 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 CHST7Q9NS84 486 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 ARHGAP28Q9P2N2 729 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 DNM3Q9UQ16 869 aa18.81■□□□□ 0.6
BRCC3-202ENST00000340647 CARNS1A5YM72 827 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 SFI1A8K8P3 1242 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 N4BP3O15049 544 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 RECQL4O94761 1208 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 CLCN4P51793 760 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 PEX3P56589 373 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 ARSHQ5FYA8 562 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 ARL6IP4Q66PJ3 421 aaKnown RBP18.8■□□□□ 0.6
BRCC3-202ENST00000340647 CEP120Q8N960 986 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 DEPTORQ8TB45 409 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 POP1Q99575 1024 aaKnown RBP18.8■□□□□ 0.6
BRCC3-202ENST00000340647 RAB34Q9BZG1 259 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 ADAM7Q9H2U9 754 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 POMKQ9H5K3 350 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 PARP2Q9UGN5 583 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.8■□□□□ 0.6
BRCC3-202ENST00000340647 STK24Q9Y6E0 443 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 MYH15Q9Y2K3 1946 aa18.8■□□□□ 0.6
BRCC3-202ENST00000340647 DOCK8Q8NF50 2099 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 LIG1P18858 919 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 GRIK3Q13003 919 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 GIT2Q14161 759 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 PPP2R5AQ15172 486 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 SYT2Q8N9I0 419 aaPredicted RBP18.79■□□□□ 0.6
BRCC3-202ENST00000340647 RPGRIP1Q96KN7 1286 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 RPS6KC1Q96S38 1066 aa18.79■□□□□ 0.6
BRCC3-202ENST00000340647 NTPCRQ9BSD7 190 aaKnown RBP18.79■□□□□ 0.6
BRCC3-202ENST00000340647 RXFP1Q9HBX9 757 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms