RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CHN2P52757 468 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 NLRP6P59044 892 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 CDR2Q01850 454 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 CETN1Q12798 172 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 STK11Q15831 433 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 RGS21Q2M5E4 152 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 ANO4Q32M45 955 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 C4orf46Q504U0 113 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.95
TDP1-201ENST00000335725 RNF169Q8NCN4 708 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.95
TDP1-201ENST00000335725 HCAR2Q8TDS4 363 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 MTMR9Q96QG7 549 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 MRPL1Q9BYD6 325 aaKnown RBP9.15□□□□□ -0.95
TDP1-201ENST00000335725 PDGFDQ9GZP0 370 aaPredicted RBP9.15□□□□□ -0.95
TDP1-201ENST00000335725 CYLDQ9NQC7 956 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 VANGL2Q9ULK5 521 aa9.15□□□□□ -0.95
TDP1-201ENST00000335725 CARMIL3Q8ND23 1372 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 PTPDC1A2A3K4 754 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 TCP11X1B4DZS4 312 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 B8ZZF3 427 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 ELL2O00472 640 aaPredicted RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 CHL1O00533 1208 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 PPP6R2O75170 966 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 POLR2CP19387 275 aaPredicted RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 IARSP41252 1262 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 POLGP54098 1239 aaPredicted RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 AMPD3Q01432 767 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 STK4Q13043 487 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 HNRNPDQ14103 355 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 PTK2BQ14289 1009 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 CWF19L2Q2TBE0 894 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 Q3C1V9 767 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 C6orf163Q5TEZ5 329 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 SLC30A10Q6XR72 485 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 APTXQ7Z2E3 356 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 PEX26Q7Z412 305 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 SNX32Q86XE0 403 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 IFNL1Q8IU54 200 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 CARNMT1Q8N4J0 409 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 SPATA5Q8NB90 893 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 TTLL11Q8NHH1 800 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 MAML1Q92585 1016 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 KRT12Q99456 494 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 XPO7Q9UIA9 1087 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 DCDC2CA8MYV0 355 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 UFL1O94874 794 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 KLHL2O95198 593 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 P4HA1P13674 534 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 NAGAP17050 411 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 SLC9C2Q5TAH2 1124 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 KRT28Q7Z3Y7 464 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 SNX29Q8TEQ0 813 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 ZFPM2Q8WW38 1151 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 NEUROD6Q96NK8 337 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 MRPS26Q9BYN8 205 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 IFIH1Q9BYX4 1025 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 KLF15Q9UIH9 416 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 HAO1Q9UJM8 370 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 RBMX2Q9Y388 322 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 PCDHB4Q9Y5E5 795 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 PNMA6EA0A0J9YXQ4 647 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 AQP9O43315 295 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 ZNF862O60290 1169 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 CFL1P23528 166 aaKnown RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 ADSLP30566 484 aaPredicted RBP9.14□□□□□ -0.95
TDP1-201ENST00000335725 CHRNEQ04844 493 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 MORC3Q14149 939 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 NT5DC1Q5TFE4 455 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 LLGL2Q6P1M3 1020 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 CADM3Q8N126 398 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 TERB1Q8NA31 727 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 DNAJC7Q99615 494 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 CD209Q9NNX6 404 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 ZDHHC7Q9NXF8 308 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 NDE1Q9NXR1 346 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
TDP1-201ENST00000335725 MAP3K15Q6ZN16 1313 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 M0QX08 132 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 RNASEH1O60930 286 aaKnown RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 KRT36O76013 467 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CALM1P0DP23 149 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CALM2P0DP24 149 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CALM3P0DP25 149 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 NEK3P51956 506 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 SLC39A14Q15043 492 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 PPP6R3Q5H9R7 873 aaPredicted RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 NFRKBQ6P4R8 1299 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 SLC38A6Q8IZM9 456 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 DDX47Q9H0S4 455 aaKnown RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 UBN1Q9NPG3 1134 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 KCNN3Q9UGI6 736 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 PCDHGB3Q9Y5G1 929 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 ACEP12821 1306 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 ZWINTO95229 277 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms