RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NTRK3Q16288 839 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 ICE2Q659A1 982 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 TGS1Q96RS0 853 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 CFAP73A6NFT4 308 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 P4HA2O15460 535 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 FGFR2P21802 821 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 GUCY1A3Q02108 690 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 KLC3Q6P597 504 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 RHPN2Q8IUC4 686 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 M0QYV0 167 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 RFC1P35251 1148 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 COPB2P35606 906 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 PPM1NQ8N819 430 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 PSD3Q9NYI0 1048 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 MAD2L2Q9UI95 211 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 GOLGA8MH3BSY2 632 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 PHF2O75151 1096 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 CDH16O75309 829 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 HSPA4LO95757 839 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 COG7P83436 770 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 TRMT10CQ7L0Y3 403 aaKnown RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 ZBED8Q8IZ13 594 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 KBTBD4Q9NVX7 518 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 INTUQ9ULD6 942 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 HPCAL4Q9UM19 191 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 APOBEC2Q9Y235 224 aaKnown RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANGPTL3Q9Y5C1 460 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 SPECC1L-ADORA2AF8WAN1 911 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 SMIM24O75264 130 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 MYBP10242 640 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 KLRC1P26715 233 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 SNRPFP62306 86 aaKnown RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 NFX1Q12986 1120 aaKnown RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 SEC23AQ15436 765 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 TEX13BQ9BXU2 312 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 MLXIPLQ9NP71 852 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 STOML1Q9UBI4 398 aa18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-201ENST00000334690 NCAPHQ15003 741 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 DNAJC7Q99615 494 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 TRAIPQ9BWF2 469 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 RPAP3Q9H6T3 665 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 HAUS5O94927 633 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 MX2P20592 715 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 MDM2Q00987 491 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 DRP2Q13474 957 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 SNRNP35Q16560 246 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 THOC1Q96FV9 657 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 MEFVO15553 781 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 ITIH2P19823 946 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 FAM102AQ5T9C2 384 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 KLHDC7AQ5VTJ3 777 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 CYFIP1Q7L576 1253 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 CNPY4Q8N129 248 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 EPN3Q9H201 632 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 ZFP69BQ9UJL9 534 aa18.14■□□□□ 0.49
TRAPPC11-201ENST00000334690 FRMD3A2A2Y4 597 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 KPNA7A9QM74 516 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 HSPA9P38646 679 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 COG2Q14746 738 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 HEATR6Q6AI08 1181 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 KCNV1Q6PIU1 500 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 C4orf50Q6ZRC1 276 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 FOXP3Q9BZS1 431 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 EIF3HO15372 352 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 HSPA8P11142 646 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 KYAT1Q16773 422 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 FAM151AQ8WW52 585 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 POLR3CQ9BUI4 534 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 WDR35Q9P2L0 1181 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 GNAT1P11488 350 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 PAMP19021 973 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 STAT5BP51692 787 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 FSCBQ5H9T9 825 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 USP38Q8NB14 1042 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 ITSN1Q15811 1721 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 ARSEP51690 589 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 ROR1Q01973 937 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 BEGAINQ9BUH8 593 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 TRIM4Q9C037 500 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 BFARQ9NZS9 450 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 PCDHB2Q9Y5E7 798 aa18.13■□□□□ 0.49
TRAPPC11-201ENST00000334690 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 HIF1AQ16665 826 aa18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 SRLQ86TD4 932 aa18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 CDKL3Q8IVW4 592 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 SH2D3CQ8N5H7 860 aa18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 DDX27Q96GQ7 796 aaKnown RBP18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 ETNK1Q9HBU6 452 aa18.12■□□□□ 0.49
TRAPPC11-201ENST00000334690 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms