RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 GPR149Q86SP6 731 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 VPS52Q8N1B4 723 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 SPIRE2Q8WWL2 714 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 CCDC43Q96MW1 224 aaKnown RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 NTPCRQ9BSD7 190 aaKnown RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 MARCH5Q9NX47 278 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 ZFP37Q9Y6Q3 630 aaPredicted RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 H0YCG3 227 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 WNT7AO00755 349 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 ARF4P18085 180 aaPredicted RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 GUCY2CP25092 1073 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 POU5F1Q01860 360 aaKnown RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 CLUL1Q15846 466 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 ERMP1Q7Z2K6 904 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
MSL3-201ENST00000312196 IFT74Q96LB3 600 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 AK8Q96MA6 479 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 RPS6KC1Q96S38 1066 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 VN1R3Q9BXE9 311 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 PLEKHA4Q9H4M7 779 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 TNFSF13BQ9Y275 285 aa9.32□□□□□ -0.92
MSL3-201ENST00000312196 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 HIDE1A8MVS5 230 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 NRP1O14786 923 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 DDHD2O94830 711 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 MCM7P33993 719 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 CYP4A11Q02928 519 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 RNASELQ05823 741 aaKnown RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 KYAT1Q16773 422 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 KREMEN2Q8NCW0 462 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 BCL7CQ8WUZ0 217 aaPredicted RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 MRPL17Q9NRX2 175 aaKnown RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 ZDHHC7Q9NXF8 308 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 HCFC2Q9Y5Z7 792 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 TDRD15B5MCY1 1934 aaKnown RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 ADH1AP07327 375 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 HOXA9P31269 272 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 GLUD2P49448 558 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 TOB1P50616 345 aaPredicted RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 CLCN4P51793 760 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 ATP2C1P98194 919 aaPredicted RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 TUSC3Q13454 348 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 MAPK6Q16659 721 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 LPPQ93052 612 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 ACSF2Q96CM8 615 aaPredicted RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 SNX27Q96L92 541 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 NT5C3AQ9H0P0 336 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 PDZD7Q9H5P4 517 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 UPF2Q9HAU5 1272 aaKnown RBP9.31□□□□□ -0.92
MSL3-201ENST00000312196 EPS15L1Q9UBC2 864 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 LRWD1Q9UFC0 647 aa9.31□□□□□ -0.92
MSL3-201ENST00000312196 INO80B-WBP1J3KQ70 363 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 URODP06132 367 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 CCT6AP40227 531 aaKnown RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 ZNF174Q15697 407 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 ZNF280BQ86YH2 543 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 RNF169Q8NCN4 708 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 GSTCDQ8NEC7 633 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 RPGRIP1Q96KN7 1286 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 DRC1Q96MC2 740 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 EIF2AQ9BY44 585 aaKnown RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 OXCT2Q9BYC2 517 aaPredicted RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 AVENQ9NQS1 362 aaPredicted RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 DNM3Q9UQ16 869 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 MTCL1Q9Y4B5 1905 aaKnown RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 TECTAO75443 2155 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 POTEMA6NI47 508 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 ZBTB39O15060 712 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 GFRA3O60609 400 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 ZC3H11AO75152 810 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSL3-201ENST00000312196 PRKCBP05771 671 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 HNRNPA1P09651 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSL3-201ENST00000312196 MCF2P10911 925 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 PROZP22891 400 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 GRM5P41594 1212 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 MAGEA9P43362 315 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 PRPF4BQ13523 1007 aaKnown RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 CUL4AQ13619 759 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 USP41Q3LFD5 358 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 PHLDB3Q6NSJ2 640 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 LILRA6Q6PI73 481 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 DTHD1Q6ZMT9 781 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 BRAPQ7Z569 592 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 DEPTORQ8TB45 409 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 DDX27Q96GQ7 796 aaKnown RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 ADPGKQ9BRR6 497 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 PTPRHQ9HD43 1115 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 ARHGAP28Q9P2N2 729 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 WNT16Q9UBV4 365 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 DUSP12Q9UNI6 340 aa9.3□□□□□ -0.92
MSL3-201ENST00000312196 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
MSL3-201ENST00000312196 BRWD1Q9NSI6 2320 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 C2CD4DB7Z1M9 353 aa9.29□□□□□ -0.92
MSL3-201ENST00000312196 USO1O60763 962 aaKnown RBP9.29□□□□□ -0.92
MSL3-201ENST00000312196 KCNE1P15382 129 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms