RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TPBGLP0DKB5 382 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 CRKP46108 304 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 MNAT1P51948 309 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 DLG4P78352 724 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 MTMR3Q13615 1198 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 POTEEQ6S8J3 1075 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 DPP8Q6V1X1 898 aaPredicted RBP5.87□□□□□ -1.47
VPS50-202ENST00000305866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS50-202ENST00000305866 NOP9Q86U38 636 aaKnown RBP5.87□□□□□ -1.47
VPS50-202ENST00000305866 ARHGEF19Q8IW93 802 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 OGFOD1Q8N543 542 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 BANK1Q8NDB2 785 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 TEKT1Q969V4 418 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 FBXL18Q96ME1 805 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 KREMEN1Q96MU8 473 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 AMNQ9BXJ7 453 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 UBA5Q9GZZ9 404 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 USP40Q9NVE5 1235 aa5.87□□□□□ -1.47
VPS50-202ENST00000305866 DDX43Q9NXZ2 648 aaKnown RBP5.87□□□□□ -1.47
VPS50-202ENST00000305866 CFAP73A6NFT4 308 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 GGPS1O95749 300 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FGGP02679 453 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 TNNC1P63316 161 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SETQ01105 290 aaPredicted RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 SATB1Q01826 763 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 CACNB1Q02641 598 aaPredicted RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 KLHL30Q0D2K2 578 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SPP2Q13103 211 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ASIC2Q16515 512 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 POTEGQ6S5H5 508 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 RNF111Q6ZNA4 994 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 C15orf39Q6ZRI6 1047 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 NLGN1Q8N2Q7 840 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 DHX38Q92620 1227 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 LRRC45Q96CN5 670 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 RPS6KC1Q96S38 1066 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SYT15Q9BQS2 421 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 MYLK2Q9H1R3 596 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 RXFP1Q9HBX9 757 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 LUC7LQ9NQ29 371 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 TBC1D7Q9P0N9 293 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ARHGAP28Q9P2N2 729 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SAP30BPQ9UHR5 308 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 TRPC5Q9UL62 973 aaPredicted RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 ZBTB39O15060 712 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 DHX15O43143 795 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 SLITRK3O94933 977 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FESP07332 822 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 MMEP08473 750 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FERP16591 822 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 PAFAH1B1P43034 410 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 YARSP54577 528 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 RTP1P59025 263 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FMO1Q01740 532 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SLMAPQ14BN4 828 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 RASA2Q15283 850 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 MTFR1Q15390 333 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 IFI16Q16666 785 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 SKIDA1Q1XH10 827 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SLC5A9Q2M3M2 681 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FAM91A1Q658Y4 838 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 RINT1Q6NUQ1 792 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ATG14Q6ZNE5 492 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ZNF720Q7Z2F6 126 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SFR1Q86XK3 245 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 KBTBD2Q8IY47 623 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 CACNA2D3Q8IZS8 1091 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SLC17A8Q8NDX2 589 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ASAP3Q8TDY4 903 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FMO2Q99518 471 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 NTPCRQ9BSD7 190 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 PDLIM7Q9NR12 457 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 LNPEPQ9UIQ6 1025 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 STX8Q9UNK0 236 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 UNC5CO95185 931 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 EEF2P13639 858 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 HPDP32754 393 aaPredicted RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 GTF2H1P32780 548 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 COPS2P61201 443 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ADAM9Q13443 819 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 SYDE2Q5VT97 1194 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 CYFIP1Q7L576 1253 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 PRUNE1Q86TP1 453 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 GLYCTKQ8IVS8 523 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 FAM71AQ8IYT1 594 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 AGGF1Q8N302 714 aaeCLIP5.86□□□□□ -1.47
VPS50-202ENST00000305866 UBR7Q8N806 425 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ERMNQ8TAM6 284 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 GATA6Q92908 595 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 DDX27Q96GQ7 796 aaKnown RBP5.86□□□□□ -1.47
VPS50-202ENST00000305866 PIDD1Q9HB75 910 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 ALG6Q9Y672 507 aa5.86□□□□□ -1.47
VPS50-202ENST00000305866 IGF2BP3O00425 579 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-202ENST00000305866 KRIT1O00522 736 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SKAP2O75563 359 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 STBD1O95210 358 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 NR3C1P04150 777 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms