RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TRAF7Q6Q0C0 670 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 EXOC8Q8IYI6 725 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 THAP11Q96EK4 314 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 PI4KBQ9UBF8 816 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 PCP11498 1178 aaKnown RBP17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 RGS7P49802 495 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 THTPAQ9BU02 230 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 HMBSP08397 361 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 PRELPP51888 382 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 SPATA21Q7Z572 469 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 EMSYQ7Z589 1322 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 PBXIP1Q96AQ6 731 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 RMDN1Q96DB5 314 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 RMDN3Q96TC7 470 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 ATP6V0A4Q9HBG4 840 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 SATB2Q9UPW6 733 aa17.78■□□□□ 0.44
TSPAN3-201ENST00000267970 EPHA10Q5JZY3 1008 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 TMEM35BQ8NCS4 154 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 OSBPL3Q9H4L5 887 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 GRAP2O75791 330 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 DEPDC1Q5TB30 811 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 PID1Q7Z2X4 250 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 DDX42Q86XP3 938 aaKnown RBP eCLIP17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 GCNAQ96QF7 691 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 PZPP20742 1482 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 P3H1Q32P28 736 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 XXYLT1Q8NBI6 393 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 SCG3Q8WXD2 468 aaKnown RBP17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 ACAP3Q96P50 834 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 PCMTD2Q9NV79 361 aa17.77■□□□□ 0.44
TSPAN3-201ENST00000267970 CC2D2BQ6DHV5 1058 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 TRABDQ9H4I3 376 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 HPCAL4Q9UM19 191 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 ATP5HO75947 161 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 ACSF2Q96CM8 615 aaPredicted RBP17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 C9orf72Q96LT7 481 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 CD248Q9HCU0 757 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 SLC8A2Q9UPR5 921 aa17.77■□□□□ 0.43
TSPAN3-201ENST00000267970 KRT8P05787 483 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 KCNA3P22001 575 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 HSPA9P38646 679 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 KNOP1Q1ED39 458 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 RARS2Q5T160 578 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 CNBD2Q96M20 576 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 SEL1LQ9UBV2 794 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 ANGPT1Q15389 498 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 LVRNQ6Q4G3 990 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 HEATR4Q86WZ0 1026 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 EPAS1Q99814 870 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 ASPSCR1Q9BZE9 553 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 TDRD3Q9H7E2 651 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 NMT1P30419 496 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 PCSK7Q16549 785 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 CLEC4FQ8N1N0 589 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 POLR3FQ9H1D9 316 aaPredicted RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 C20orf96Q9NUD7 363 aaPredicted RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 NBPF26B4DH59 902 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 CYP2E1P05181 493 aaPredicted RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 ATP6V1B1P15313 513 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 SDC4P31431 198 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 BCAR1P56945 870 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 EIF3EP60228 445 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 CCNA1P78396 465 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 SHC4Q6S5L8 630 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 CCDC33Q8N5R6 958 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 NBPF15Q8N660 670 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 SPATA4Q8NEY3 305 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 ASIC4Q96FT7 647 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 YIPF2Q9BWQ6 316 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 ZSCAN32Q9NX65 697 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 MKL2Q9ULH7 1088 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 NUP153P49790 1475 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 MYBL1P10243 752 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 SGO1Q5FBB7 561 aa17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 BZW1Q7L1Q6 419 aaKnown RBP17.76■□□□□ 0.43
TSPAN3-201ENST00000267970 HDAC4P56524 1084 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 KIRREL3Q8IZU9 778 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 RBM46Q8TBY0 533 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 RNPC3Q96LT9 517 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 CELF4Q9BZC1 486 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 ORC4O43929 436 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 APOA1P02647 267 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 MDM1Q8TC05 714 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 MAD2L2Q9UI95 211 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 HUS1O60921 280 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 SEC24CP53992 1094 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 CCDC142Q17RM4 750 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 PLD3Q8IV08 490 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 SPIRE2Q8WWL2 714 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 STRBPQ96SI9 672 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 FAM205CA6NFA0 338 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 PLOD1Q02809 727 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms