RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ECEL1O95672 775 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 NQO1P15559 274 aaKnown RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 ART4Q93070 314 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 CCDC17Q96LX7 622 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 ZC3H12CQ9C0D7 883 aaKnown RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 FOCADQ5VW36 1801 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 CYP26A1O43174 497 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 CALCAP01258 141 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 HSPA6P17066 643 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 TLDC1Q6P9B6 456 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 NOP9Q86U38 636 aaKnown RBP18.73■□□□□ 0.59
TRAM1-201ENST00000262213 ZNF564Q8TBZ8 553 aaPredicted RBP18.73■□□□□ 0.59
TRAM1-201ENST00000262213 TEKT1Q969V4 418 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 ZNF653Q96CK0 615 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 KCNQ5Q9NR82 932 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 DMAC2Q9NW81 257 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 GOLGA8IPA6NC78 632 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 GOLGA8JA6NMD2 632 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 HIP1RO75146 1068 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 BBOX1O75936 387 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 KRT17Q04695 432 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 PPP2R5AQ15172 486 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 CLUL1Q15846 466 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 KYNUQ16719 465 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 STXBP4Q6ZWJ1 553 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 SLC47A2Q86VL8 602 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 KIAA0825Q8IV33 1275 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 PPM1KQ8N3J5 372 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 KLHL29Q96CT2 875 aa18.73■□□□□ 0.59
TRAM1-201ENST00000262213 RSRC1Q96IZ7 334 aaKnown RBP18.73■□□□□ 0.59
TRAM1-201ENST00000262213 IGLV3-22A0A075B6J6 115 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 CRY2Q49AN0 593 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 CCDC174Q6PII3 467 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 FAM118BQ9BPY3 351 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 CBWD1Q9BRT8 395 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 A0A1B0GUA9 196 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 RTN2O75298 545 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 CIITAP33076 1130 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 BTNL9Q6UXG8 535 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 THSD7AQ9UPZ6 1657 aa18.72■□□□□ 0.59
TRAM1-201ENST00000262213 ARHGEF35A5YM69 484 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 SUN1O94901 812 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 KRT16P08779 473 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 ALAS1P13196 640 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 CHRNB2P17787 502 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 VAMP7P51809 220 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 VSTM1Q6UX27 236 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 MIGA2Q7L4E1 593 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 PAIP2Q9BPZ3 127 aaKnown RBP18.71■□□□□ 0.59
TRAM1-201ENST00000262213 WNT8AQ9H1J5 351 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 CCDC134Q9H6E4 229 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 NYAP2Q9P242 653 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 CFAP73A6NFT4 308 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 NEBLO76041 1014 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 HSPA1LP34931 641 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 CETN1Q12798 172 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 MPP2Q14168 576 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 SGO2Q562F6 1265 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 CROCCP2Q86T23 111 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 RUNDC3BQ96NL0 473 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 TUFT1Q9NNX1 390 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 AAASQ9NRG9 546 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 ZBTB21Q9ULJ3 1066 aa18.71■□□□□ 0.59
TRAM1-201ENST00000262213 DIAPH2O60879 1101 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 GBP1P32455 592 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 RRP1BQ14684 758 aaKnown RBP18.7■□□□□ 0.58
TRAM1-201ENST00000262213 SIX1Q15475 284 aaPredicted RBP18.7■□□□□ 0.58
TRAM1-201ENST00000262213 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 RPS6KC1Q96S38 1066 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 COA1Q9GZY4 146 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 CHST7Q9NS84 486 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 USP21Q9UK80 565 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 PPEF1O14829 653 aaPredicted RBP18.7■□□□□ 0.58
TRAM1-201ENST00000262213 KIF1CO43896 1103 aaKnown RBP18.7■□□□□ 0.58
TRAM1-201ENST00000262213 PSMD10O75832 226 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 BMP3P12645 472 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 BRAFP15056 766 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 CRKP46108 304 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 PRELPP51888 382 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 SLC15A2Q16348 729 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 EPS8L1Q8TE68 723 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 MKL1Q969V6 931 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 LXNQ9BS40 222 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 TMEM109Q9BVC6 243 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 UNC45AQ9H3U1 944 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 EIF4E1BA6NMX2 242 aaKnown RBP18.7■□□□□ 0.58
TRAM1-201ENST00000262213 ARP10275 920 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 RWDD2BP57060 319 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 JAG1P78504 1218 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 DAB2IPQ5VWQ8 1189 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 FAM47EQ6ZV65 393 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 SPATA21Q7Z572 469 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 SRRM1Q8IYB3 904 aaKnown RBP18.7■□□□□ 0.58
TRAM1-201ENST00000262213 CYP4X1Q8N118 509 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 RMDN2Q96LZ7 410 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 NACC1Q96RE7 527 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 SLC24A3Q9HC58 644 aa18.7■□□□□ 0.58
TRAM1-201ENST00000262213 GOLGB1Q14789 3259 aaKnown RBP18.69■□□□□ 0.58
TRAM1-201ENST00000262213 STX2P32856 288 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms