RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CBWD5Q5RIA9 395 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 JAMLQ86YT9 394 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 SLC30A5Q8TAD4 765 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 PKD2L1Q9P0L9 805 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 UBE4BO95155 1302 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 FERP16591 822 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 IFNAR2P48551 515 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 PLS1Q14651 629 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 PPP2R5EQ16537 467 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 HS2ST1Q7LGA3 356 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 CARD9Q9H257 536 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 SEMA4AQ9H3S1 761 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 BATF3Q9NR55 127 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 GRHL1Q9NZI5 618 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 KCND2Q9NZV8 630 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 DIS3Q9Y2L1 958 aaKnown RBP20.35■□□□□ 0.85
SNX4-201ENST00000251775 NCANO14594 1321 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 IGSF9BQ9UPX0 1349 aa20.35■□□□□ 0.85
SNX4-201ENST00000251775 ZNF536O15090 1300 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 EVI5O60447 810 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 SNX3O60493 162 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 HIP1RO75146 1068 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 OAS1P00973 400 aaKnown RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 TRIM49P0CI25 452 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 TRIM49CP0CI26 452 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 STAT1P42224 750 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 PTGER2P43116 358 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 DRG2P55039 364 aaKnown RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 C6orf118Q5T5N4 469 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 ZNF772Q68DY9 489 aaPredicted RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 PGAP2Q9UHJ9 254 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 ARHGEF35A5YM69 484 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 ALDH5A1P51649 535 aaPredicted RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 HSD17B4P51659 736 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 ADCY2Q08462 1091 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 ZNF211Q13398 564 aaPredicted RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 DHX34Q14147 1143 aaKnown RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 GRIPAP1Q4V328 841 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 IL31RAQ8NI17 732 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 EPS8L3Q8TE67 593 aaKnown RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 RFFLQ8WZ73 363 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 RIT2Q99578 217 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 STRA6Q9BX79 667 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 NSRP1Q9H0G5 558 aaKnown RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 DEFB129Q9H1M3 183 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 CNOT7Q9UIV1 285 aaKnown RBP20.34■□□□□ 0.85
SNX4-201ENST00000251775 GGT7Q9UJ14 662 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 DNAJC12Q9UKB3 198 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
SNX4-201ENST00000251775 GOLGA6L10A0A0M3HER8 536 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 SOX5P35711 763 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 CNGA2Q16280 664 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 GALNTL6Q49A17 601 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 TNFAIP8L3Q5GJ75 292 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 FKBP1CQ5VVH2 108 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 STXBP4Q6ZWJ1 553 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 BZW1Q7L1Q6 419 aaKnown RBP20.33■□□□□ 0.85
SNX4-201ENST00000251775 PDGFDQ9GZP0 370 aaPredicted RBP20.33■□□□□ 0.85
SNX4-201ENST00000251775 SCAF8Q9UPN6 1271 aaKnown RBP20.33■□□□□ 0.85
SNX4-201ENST00000251775 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 RGPD3A6NKT7 1758 aaPredicted RBP20.33■□□□□ 0.85
SNX4-201ENST00000251775 RGPD4Q7Z3J3 1758 aa20.33■□□□□ 0.85
SNX4-201ENST00000251775 NFIBO00712 420 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 DRAP1Q14919 205 aaPredicted RBP20.33■□□□□ 0.84
SNX4-201ENST00000251775 NAIF1Q69YI7 327 aaPredicted RBP20.33■□□□□ 0.84
SNX4-201ENST00000251775 MAEAQ7L5Y9 396 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 UHMK1Q8TAS1 419 aaKnown RBP20.33■□□□□ 0.84
SNX4-201ENST00000251775 ZNF570Q96NI8 536 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 STK33Q9BYT3 514 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 GPR88Q9GZN0 384 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 NOP53Q9NZM5 478 aaKnown RBP20.33■□□□□ 0.84
SNX4-201ENST00000251775 CD2APQ9Y5K6 639 aa20.33■□□□□ 0.84
SNX4-201ENST00000251775 ICAM1P05362 532 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 PTGIRP43119 386 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 GLYCTKQ8IVS8 523 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 NAP1L3Q99457 506 aaPredicted RBP20.32■□□□□ 0.84
SNX4-201ENST00000251775 TMEM109Q9BVC6 243 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 ECT2Q9H8V3 914 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 KCNH7Q9NS40 1196 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 TMEM253P0C7T8 217 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 SLCO1A2P46721 670 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 PADI6Q6TGC4 694 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 MIER3Q7Z3K6 550 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 FAM83AQ86UY5 434 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 RDH13Q8NBN7 331 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 CLEC4DQ8WXI8 215 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 ALG3Q92685 438 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 C18orf8Q96DM3 657 aa20.32■□□□□ 0.84
SNX4-201ENST00000251775 DHX15O43143 795 aaKnown RBP20.31■□□□□ 0.84
SNX4-201ENST00000251775 ABCB4P21439 1286 aa20.31■□□□□ 0.84
SNX4-201ENST00000251775 RPL21P46778 160 aaKnown RBP20.31■□□□□ 0.84
SNX4-201ENST00000251775 PDE6CP51160 858 aa20.31■□□□□ 0.84
SNX4-201ENST00000251775 CCNHP51946 323 aaPredicted RBP20.31■□□□□ 0.84
SNX4-201ENST00000251775 SYCP3Q8IZU3 236 aa20.31■□□□□ 0.84
SNX4-201ENST00000251775 PRCCQ92733 491 aaPredicted RBP20.31■□□□□ 0.84
SNX4-201ENST00000251775 ZNF341Q9BYN7 854 aa20.31■□□□□ 0.84
SNX4-201ENST00000251775 INTS2Q9H0H0 1204 aaKnown RBP20.31■□□□□ 0.84
SNX4-201ENST00000251775 IGF2BP3O00425 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms