RNA–Protein interactions for RNA: YAR029W

YAR029W, Transcript of Member of DUP240 gene family but contains no transmembrane domains, yeast

Gene YAR029W, Length 225 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR029W	YAR029W	YCR102C	P25608	368 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	ATG15	P25641	520 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	VPH1	P32563	840 aa	Known RBP	0.64	□□□□□ -2.31
YAR029W	YAR029W	YHL026C	P38740	315 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	YDR089W	P38966	869 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	SHQ1	P40486	507 aa	Predicted RBP	0.64	□□□□□ -2.31
YAR029W	YAR029W	INA22	P40576	216 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	YPT32	P51996	222 aa	Known RBP	0.64	□□□□□ -2.31
YAR029W	YAR029W	YGL114W	P53134	725 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	RSC1	P53236	928 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	OKP1	P53298	406 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	YNL146W	P53906	100 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	EOS1	P53938	366 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	MRS2	Q01926	470 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	ISD11	Q6Q560	94 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	PAN1	P32521	1480 aa		0.64	□□□□□ -2.31
YAR029W	YAR029W	RAD7	P06779	565 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	RPL16B	P26785	198 aa	Known RBP	0.63	□□□□□ -2.31
YAR029W	YAR029W	AEP1	P32493	518 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	YPC1	P38298	316 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	TIF34	P40217	347 aa	Known RBP	0.63	□□□□□ -2.31
YAR029W	YAR029W	JEM1	P40358	645 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	COG7	P53195	279 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	STE23	Q06010	1027 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	DBP9	Q06218	594 aa	Known RBP	0.63	□□□□□ -2.31
YAR029W	YAR029W	YPL247C	Q12523	523 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	YBL112C	Q3E7Y4	105 aa		0.63	□□□□□ -2.31
YAR029W	YAR029W	NUP157	P40064	1391 aa	Known RBP	0.62	□□□□□ -2.31
YAR029W	YAR029W	YGR168C	P53293	376 aa		0.62	□□□□□ -2.31
YAR029W	YAR029W	BUR2	Q05949	395 aa		0.62	□□□□□ -2.31
YAR029W	YAR029W	FRE6	Q12473	712 aa		0.62	□□□□□ -2.31
YAR029W	YAR029W	RPL18A	P0CX49	186 aa	Known RBP	0.61	□□□□□ -2.31
YAR029W	YAR029W	RPL18B	P0CX50	186 aa	Known RBP	0.61	□□□□□ -2.31
YAR029W	YAR029W	COT1	P32798	439 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	ZRT1	P32804	376 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	YKL162C	P36052	402 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	RXT2	P38255	430 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	YER135C	P40082	130 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	AVT7	P40501	490 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	RPE1	P46969	238 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	MPP10	P47083	593 aa	Known RBP	0.61	□□□□□ -2.31
YAR029W	YAR029W	YPL039W	Q03080	316 aa		0.61	□□□□□ -2.31
YAR029W	YAR029W	YEL009C-A	A0A023PZF2	135 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	CDC7	P06243	507 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	TAL1	P15019	335 aa	Known RBP	0.6	□□□□□ -2.31
YAR029W	YAR029W	BMH1	P29311	267 aa	Known RBP	0.6	□□□□□ -2.31
YAR029W	YAR029W	KRE6	P32486	720 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	SCM4	P32564	187 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	DOA4	P32571	926 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	POP8	P38208	133 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	PHO89	P38361	574 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	YHI9	P38765	294 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	LIN1	P38852	340 aa	Predicted RBP	0.6	□□□□□ -2.31
YAR029W	YAR029W	GON7	P46984	123 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	SWC4	P53201	476 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	YMR114C	Q04471	368 aa	Known RBP	0.6	□□□□□ -2.31
YAR029W	YAR029W	ECM18	Q04623	453 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	INM2	Q05533	292 aa		0.6	□□□□□ -2.31
YAR029W	YAR029W	RNR2	P09938	399 aa	Known RBP	0.59	□□□□□ -2.31
YAR029W	YAR029W	RPL31A	P0C2H8	113 aa	Known RBP	0.59	□□□□□ -2.31
YAR029W	YAR029W	ERG2	P32352	222 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
YAR029W	YAR029W	SPT8	P38915	602 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	SEN34	P39707	275 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	GDS1	P41913	522 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	YJL118W	P47022	219 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	CUE3	P53137	624 aa	Known RBP	0.59	□□□□□ -2.31
YAR029W	YAR029W	DAD3	P69850	94 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	YML018C	Q03730	393 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	TAZ1	Q06510	381 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	YOL019W	Q08157	551 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	IZH4	Q99393	312 aa		0.59	□□□□□ -2.31
YAR029W	YAR029W	POX1	P13711	748 aa		0.58	□□□□□ -2.32
YAR029W	YAR029W	MSS116	P15424	664 aa	Known RBP	0.58	□□□□□ -2.32
YAR029W	YAR029W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
YAR029W	YAR029W	CAT2	P32796	670 aa	Known RBP	0.58	□□□□□ -2.32
YAR029W	YAR029W	SFC1	P33303	322 aa		0.58	□□□□□ -2.32
YAR029W	YAR029W	GDH2	P33327	1092 aa	Known RBP	0.58	□□□□□ -2.32
YAR029W	YAR029W	CSG2	P35206	410 aa		0.58	□□□□□ -2.32
YAR029W	YAR029W	LAS1	P36146	502 aa	Predicted RBP	0.58	□□□□□ -2.32
YAR029W	YAR029W	DRE2	P36152	348 aa		0.58	□□□□□ -2.32
YAR029W	YAR029W	PEP8	P40335	379 aa		0.58	□□□□□ -2.32
YAR029W	YAR029W	SMT3	Q12306	101 aa	Known RBP	0.58	□□□□□ -2.32
YAR029W	YAR029W	SGA1	P08019	549 aa		0.57	□□□□□ -2.32
YAR029W	YAR029W	PPH21	P23594	369 aa		0.57	□□□□□ -2.32
YAR029W	YAR029W	RPL10	P41805	221 aa	Known RBP	0.57	□□□□□ -2.32
YAR029W	YAR029W	PEX12	Q04370	399 aa		0.57	□□□□□ -2.32
YAR029W	YAR029W	SAM4	Q08985	325 aa	Known RBP	0.57	□□□□□ -2.32
YAR029W	YAR029W	YOR114W	Q12219	294 aa		0.57	□□□□□ -2.32
YAR029W	YAR029W	YPR064W	Q12492	139 aa		0.57	□□□□□ -2.32
YAR029W	YAR029W	PUT1	P09368	476 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	COS2	P0CX12	379 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	COS3	P0CX13	379 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	GAL3	P13045	520 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	DPB2	P24482	689 aa	Predicted RBP	0.56	□□□□□ -2.32
YAR029W	YAR029W	HMT1	P38074	348 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	SIF2	P38262	535 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	ARN2	P38724	620 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	DPP1	Q05521	289 aa		0.56	□□□□□ -2.32
YAR029W	YAR029W	LOA1	Q06508	300 aa		0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 138.5 ms