RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 BMS1Q14692 1282 aaKnown RBP15.7■□□□□ 0.1
SDHD-209ENST00000640554 DCAF4L1Q3SXM0 396 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 ARSHQ5FYA8 562 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 SV2BQ7L1I2 683 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.7■□□□□ 0.1
SDHD-209ENST00000640554 LPPQ93052 612 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 EIF2AQ9BY44 585 aaKnown RBP15.7■□□□□ 0.1
SDHD-209ENST00000640554 MRPL4Q9BYD3 311 aaKnown RBP15.7■□□□□ 0.1
SDHD-209ENST00000640554 LRRC27Q9C0I9 530 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 TBC1D13Q9NVG8 400 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 TNFSF13BQ9Y275 285 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 LOXHD1Q8IVV2 1947 aa15.7■□□□□ 0.1
SDHD-209ENST00000640554 ARID2Q68CP9 1835 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 B4GALT5O43286 388 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 BRD1O95696 1058 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 ALDH2P05091 517 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 ZNF131P52739 623 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 STRN3Q13033 797 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 MCM6Q14566 821 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 SKIV2LQ15477 1246 aaKnown RBP15.69■□□□□ 0.1
SDHD-209ENST00000640554 USP49Q70CQ1 688 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 POF1BQ8WVV4 589 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 MRPS27Q92552 414 aaKnown RBP15.69■□□□□ 0.1
SDHD-209ENST00000640554 FAM193BQ96PV7 902 aaPredicted RBP15.69■□□□□ 0.1
SDHD-209ENST00000640554 TMEM175Q9BSA9 504 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 CUEDC2Q9H467 287 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 POLD4Q9HCU8 107 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 ALG13Q9NP73 1137 aaKnown RBP15.69■□□□□ 0.1
SDHD-209ENST00000640554 THEGQ9P2T0 379 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 RCOR1Q9UKL0 485 aa15.69■□□□□ 0.1
SDHD-209ENST00000640554 TRANK1O15050 2925 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 MYO9BQ13459 2157 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 SFI1A8K8P3 1242 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 NR1I2O75469 434 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 FAM13AO94988 1023 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 NPTXRO95502 500 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 BCAR1P56945 870 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 GIT2Q14161 759 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 SPECC1Q5M775 1068 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 ATF7IP2Q5U623 682 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 FOXD4L5Q5VV16 416 aaPredicted RBP15.68■□□□□ 0.1
SDHD-209ENST00000640554 TMEM161BQ8NDZ6 487 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 FOXD4L4Q8WXT5 416 aaPredicted RBP15.68■□□□□ 0.1
SDHD-209ENST00000640554 HLA-CQ95604 372 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 PYM1Q9BRP8 204 aaKnown RBP15.68■□□□□ 0.1
SDHD-209ENST00000640554 PDZD7Q9H5P4 517 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 NGRNQ9NPE2 291 aaKnown RBP15.68■□□□□ 0.1
SDHD-209ENST00000640554 INPP5FQ9Y2H2 1132 aa15.68■□□□□ 0.1
SDHD-209ENST00000640554 ARL5CA6NH57 179 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 MEIS3P2A8K0S8 358 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 TBCAO75347 108 aaKnown RBP15.67■□□□□ 0.1
SDHD-209ENST00000640554 LIG1P18858 919 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 STAT6P42226 847 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 NCKAP1LP55160 1127 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 MRPS5P82675 430 aaKnown RBP15.67■□□□□ 0.1
SDHD-209ENST00000640554 RAD51AP2Q09MP3 1159 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 DHX8Q14562 1220 aaKnown RBP15.67■□□□□ 0.1
SDHD-209ENST00000640554 LONRF3Q496Y0 759 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 NT5DC1Q5TFE4 455 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 ZPBP2Q6X784 338 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 SLC39A11Q8N1S5 342 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 MYCT1Q8N699 235 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 TMEM169Q96HH4 297 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 ACO2Q99798 780 aaKnown RBP15.67■□□□□ 0.1
SDHD-209ENST00000640554 REEP2Q9BRK0 252 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 KIFC3Q9BVG8 833 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 NRDE2Q9H7Z3 1164 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 TLR9Q9NR96 1032 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 SEL1LQ9UBV2 794 aa15.67■□□□□ 0.1
SDHD-209ENST00000640554 SLC16A4O15374 487 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 TRAK2O60296 914 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 ZC3H11AO75152 810 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDHD-209ENST00000640554 GALTP07902 379 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 MAPTP10636 758 aaKnown RBP15.66■□□□□ 0.1
SDHD-209ENST00000640554 ME1P48163 572 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 KRT85P78386 507 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 AMPD3Q01432 767 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 CAMK1Q14012 370 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 COL19A1Q14993 1142 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 HAUS6Q7Z4H7 955 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 IQUBQ8NA54 791 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 MICAL1Q8TDZ2 1067 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 GAD1Q99259 594 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 CDCA3Q99618 268 aaPredicted RBP15.66■□□□□ 0.1
SDHD-209ENST00000640554 NXF3Q9H4D5 531 aaKnown RBP15.66■□□□□ 0.1
SDHD-209ENST00000640554 PTPRHQ9HD43 1115 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 PARP2Q9UGN5 583 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 FAN1Q9Y2M0 1017 aa15.66■□□□□ 0.1
SDHD-209ENST00000640554 RALGAPA2Q2PPJ7 1873 aa15.65■□□□□ 0.1
SDHD-209ENST00000640554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
SDHD-209ENST00000640554 NPHP3-ACAD11A0A0J9YXS1 232 aa15.65■□□□□ 0.1
SDHD-209ENST00000640554 TOM1L1O75674 476 aa15.65■□□□□ 0.1
SDHD-209ENST00000640554 MCF2P10911 925 aa15.65■□□□□ 0.1
SDHD-209ENST00000640554 GAP43P17677 238 aa15.65■□□□□ 0.1
SDHD-209ENST00000640554 NUCB2P80303 420 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms