RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 ZNF568Q3ZCX4 644 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 IFIT1BQ5T764 474 aaKnown RBP8□□□□□ -1.13
FAM49B-230ENST00000639004 BORAQ6PGQ7 559 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 LILRA6Q6PI73 481 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 FAM180AQ6UWF9 173 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 Q6ZVL8 140 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 CFHR4Q92496 578 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 LRGUKQ96M69 825 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 NMRK2Q9NPI5 230 aa8□□□□□ -1.13
FAM49B-230ENST00000639004 FAM171A2A8MVW0 826 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 CNOT4O95628 575 aaKnown RBP7.99□□□□□ -1.13
FAM49B-230ENST00000639004 VSIG10L2P0DP72 767 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 HSPA6P17066 643 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 GJC2Q5T442 439 aaPredicted RBP7.99□□□□□ -1.13
FAM49B-230ENST00000639004 CCDC181Q5TID7 509 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 B3GNT9Q6UX72 402 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 LGI4Q8N135 537 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 PRR18Q8N4B5 295 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 LILRA3Q8N6C8 439 aaPredicted RBP7.99□□□□□ -1.13
FAM49B-230ENST00000639004 ANKRD53Q8N9V6 530 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 ZNF480Q8WV37 535 aa7.99□□□□□ -1.13
FAM49B-230ENST00000639004 MATN2O00339 956 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 OFD1O75665 1012 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 JUNP05412 331 aaKnown RBP7.98□□□□□ -1.13
FAM49B-230ENST00000639004 ECHS1P30084 290 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 ZNF267Q14586 743 aaPredicted RBP7.98□□□□□ -1.13
FAM49B-230ENST00000639004 MINDY4Q4G0A6 757 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 ATAT1Q5SQI0 421 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 USP45Q70EL2 814 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 PLEKHH3Q7Z736 793 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 MARCH10Q8NA82 808 aaPredicted RBP7.98□□□□□ -1.13
FAM49B-230ENST00000639004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.98□□□□□ -1.13
FAM49B-230ENST00000639004 HPS3Q969F9 1004 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 HDAC10Q969S8 669 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 RELTQ969Z4 430 aa7.98□□□□□ -1.13
FAM49B-230ENST00000639004 RPL10LQ96L21 214 aaKnown RBP7.98□□□□□ -1.13
FAM49B-230ENST00000639004 GOLGA6CA6NDK9 693 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 GOLGA6BA6NDN3 693 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 AP1G1O43747 822 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 GOLGA6DP0CG33 693 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 ZSCAN22P10073 491 aaPredicted RBP7.97□□□□□ -1.13
FAM49B-230ENST00000639004 SLC6A9P48067 706 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 IL10RAQ13651 578 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 KRT40Q6A162 431 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 MIGA2Q7L4E1 593 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 GPHA2Q96T91 129 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 C7orf25Q9BPX7 421 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 USP40Q9NVE5 1235 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 GOLGA6AQ9NYA3 693 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 TRPS1Q9UHF7 1281 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 SIK3Q9Y2K2 1263 aa7.97□□□□□ -1.13
FAM49B-230ENST00000639004 DTNBO60941 627 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 ENDOD1O94919 500 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 RAC3P60763 192 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 SAFB2Q14151 953 aaKnown RBP eCLIP7.96□□□□□ -1.14
FAM49B-230ENST00000639004 GFOD2Q3B7J2 385 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 ARHGEF18Q6ZSZ5 1173 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 NOL8Q76FK4 1167 aaKnown RBP7.96□□□□□ -1.14
FAM49B-230ENST00000639004 SLC35G2Q8TBE7 412 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 FEZF2Q8TBJ5 459 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 RABGGTAQ92696 567 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 KAT5Q92993 513 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 MVB12AQ96EY5 273 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 TAAR9Q96RI9 348 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 BCO1Q9HAY6 547 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 GEMIN8Q9NWZ8 242 aaKnown RBP7.96□□□□□ -1.14
FAM49B-230ENST00000639004 GPRC5DQ9NZD1 345 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 PUF60Q9UHX1 559 aaKnown RBP7.96□□□□□ -1.14
FAM49B-230ENST00000639004 PCDHA13Q9Y5I0 950 aa7.96□□□□□ -1.14
FAM49B-230ENST00000639004 PMS2P1A4D2B8 440 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 VSTM5A8MXK1 200 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 SLC26A4O43511 780 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 ITGA10O75578 1167 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 GYPEP15421 78 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 BMP7P18075 431 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 SREBF1P36956 1147 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 PPP2CBP62714 309 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 PPP2CAP67775 309 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 DUSP2Q05923 314 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 ADGRE4PQ86SQ3 457 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 RHOT1Q8IXI2 618 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 OR7D4Q8NG98 312 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 DIS3LQ8TF46 1054 aaKnown RBP7.95□□□□□ -1.14
FAM49B-230ENST00000639004 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 NEIL1Q96FI4 390 aaPredicted RBP7.95□□□□□ -1.14
FAM49B-230ENST00000639004 KCNC2Q96PR1 638 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 MAP3K14Q99558 947 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 DUSP10Q9Y6W6 482 aa7.95□□□□□ -1.14
FAM49B-230ENST00000639004 NRP1O14786 923 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 KIF3BO15066 747 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 ADCY6O43306 1168 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 SASH1O94885 1247 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 CRHR1P34998 444 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 EPHB4P54760 987 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 DSC2Q02487 901 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 GRAMD1CQ8IYS0 662 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 CMTM4Q8IZR5 234 aa7.94□□□□□ -1.14
FAM49B-230ENST00000639004 PQLC1Q8N2U9 271 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms