RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ACVRL1P37023 503 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 UBE3CQ15386 1083 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 SPTY2D1Q68D10 685 aaPredicted RBP4.57□□□□□ -1.68
SRP54-214ENST00000630962 BTNL9Q6UXG8 535 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 NECAB2Q7Z6G3 386 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 AMER2Q8N7J2 671 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 UBR7Q8N806 425 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 ATL2Q8NHH9 583 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 AHCYL2Q96HN2 611 aaKnown RBP4.57□□□□□ -1.68
SRP54-214ENST00000630962 ORAI2Q96SN7 254 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 MNTQ99583 582 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 CPPED1Q9BRF8 314 aaPredicted RBP4.57□□□□□ -1.68
SRP54-214ENST00000630962 FDXACB1Q9BRP7 624 aaPredicted RBP4.57□□□□□ -1.68
SRP54-214ENST00000630962 MENTQ9BUN1 341 aa4.57□□□□□ -1.68
SRP54-214ENST00000630962 PRR5-ARHGAP8B1AHC4 643 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 DIRC3C9JPN6 131 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 K7ESF4 209 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 TRIM24O15164 1050 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 FSHBP01225 129 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 CLEC2LP0C7M8 214 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 CANXP27824 592 aaKnown RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 TMPRSS15P98073 1019 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 PDCD1Q15116 288 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 CT83Q5H943 113 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 DRICH1Q6PGQ1 229 aaPredicted RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 STRA8Q7Z7C7 330 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 LYSMD2Q8IV50 215 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 SYNE4Q8N205 404 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 CACTINQ8WUQ7 758 aaKnown RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 ZNF480Q8WV37 535 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 LMBR1Q8WVP7 490 aa4.56□□□□□ -1.68
SRP54-214ENST00000630962 EAF2Q96CJ1 260 aaPredicted RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 FAM193BQ96PV7 902 aaPredicted RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 DCLRE1CQ96SD1 692 aaKnown RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 PUS7LQ9H0K6 701 aaKnown RBP4.56□□□□□ -1.68
SRP54-214ENST00000630962 ZNF202O95125 648 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 LPLP06858 475 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 ADH4P08319 380 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 CTSSP25774 331 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 CASRP41180 1078 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 ID4P47928 161 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 RABGGTBP53611 331 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 APBA1Q02410 837 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 TRIM25Q14258 630 aaKnown RBP4.55□□□□□ -1.68
SRP54-214ENST00000630962 ACAP1Q15027 740 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 MUM1Q2TAK8 710 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 MUM1L1Q5H9M0 696 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 RABL3Q5HYI8 236 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 AMOTL1Q8IY63 956 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 ELOA2Q8IYF1 753 aaPredicted RBP4.55□□□□□ -1.68
SRP54-214ENST00000630962 SLC16A11Q8NCK7 471 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 GPR156Q8NFN8 814 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 ZNF483Q8TF39 744 aaPredicted RBP4.55□□□□□ -1.68
SRP54-214ENST00000630962 SORCS2Q96PQ0 1159 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 PRRX2Q99811 253 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 GREM2Q9H772 168 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 GPRC5DQ9NZD1 345 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 CEP72Q9P209 647 aa4.55□□□□□ -1.68
SRP54-214ENST00000630962 CADPSQ9ULU8 1353 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 KLRG2A4D1S0 409 aaPredicted RBP4.54□□□□□ -1.68
SRP54-214ENST00000630962 LCHNA4D1U4 455 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 PJA2O43164 708 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 TEX33O43247 280 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 CFBP00751 764 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 SPATA31D3P0C874 917 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 FLT3LGP49771 235 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 SCNN1GP51170 649 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 MXRA7P84157 204 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 VPS72Q15906 364 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 SPATA31D4Q6ZUB0 917 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.54□□□□□ -1.68
SRP54-214ENST00000630962 ZFP28Q8NHY6 868 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 CYFIP2Q96F07 1278 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 ACE2Q9BYF1 805 aaPredicted RBP4.54□□□□□ -1.68
SRP54-214ENST00000630962 MS4A5Q9H3V2 200 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 BCO1Q9HAY6 547 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 IFT122Q9HBG6 1241 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 RBM12Q9NTZ6 932 aaKnown RBP4.54□□□□□ -1.68
SRP54-214ENST00000630962 DPP7Q9UHL4 492 aa4.54□□□□□ -1.68
SRP54-214ENST00000630962 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.54□□□□□ -1.68
SRP54-214ENST00000630962 GAGE12BA1L429 117 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 GAGE12HA6NDE8 117 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 FAM171A2A8MVW0 826 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 PLSCR1O15162 318 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 AKAP8O43823 692 aaKnown RBP4.53□□□□□ -1.68
SRP54-214ENST00000630962 TMEM127O75204 238 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 ITGA10O75578 1167 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 ENDOD1O94919 500 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 C1SP09871 688 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 RBP3P10745 1247 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 ECHS1P30084 290 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 SCAND1P57086 179 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 TGFB2P61812 414 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 TOB2Q14106 344 aaPredicted RBP4.53□□□□□ -1.68
SRP54-214ENST00000630962 MBNL2Q5VZF2 373 aaKnown RBP4.53□□□□□ -1.68
SRP54-214ENST00000630962 ARMC6Q6NXE6 501 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 Q6ZRM9 215 aa4.53□□□□□ -1.68
SRP54-214ENST00000630962 MSL3Q8N5Y2 521 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms